JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hq4a1.name2015-04-17 19:20 0 Job name flag file
[ ]jp_uTwmiN0.align2015-04-17 21:54 2.1KPSIBLAST alignment in FASTA format
[TXT]jp_uTwmiN0.als2015-04-17 21:54 2.8KAlscript command file for PS/PDF output
[ ]jp_uTwmiN0.blast.gz2015-04-17 21:54 3.9KCompressed PSIBLAST output file
[TXT]jp_uTwmiN0.coils.csv2015-04-17 21:54 924 COILS output in CSV format
[ ]jp_uTwmiN0.coilseq.lupas_142015-04-17 21:54 6.3KCOILS output, window length 14
[ ]jp_uTwmiN0.coilseq.lupas_212015-04-17 21:54 6.3KCOILS output, window length 21
[ ]jp_uTwmiN0.coilseq.lupas_282015-04-17 21:54 6.3KCOILS output, window length 28
[ ]jp_uTwmiN0.concise2015-04-17 21:54 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_uTwmiN0.concise.blc2015-04-17 21:54 4.4KBLC format prediction and alignment data
[ ]jp_uTwmiN0.concise.fasta2015-04-17 21:54 3.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_uTwmiN0.concise.pdf2015-04-17 21:54 30KPDF prediction and alignment data
[ ]jp_uTwmiN0.concise.ps2015-04-17 21:54 517KPrediction: coiled-coil, solvent, alignment
[ ]jp_uTwmiN0.fasta2015-04-17 21:51 164 Input query sequence in FASTA format
[ ]jp_uTwmiN0.full_MSA.fasta2015-04-17 21:54 3.5KFull MSA before JPred filters in FASTA
[TXT]jp_uTwmiN0.full_MSA.fasta.noGaps.html2015-04-17 21:54 5.3KFull MSA before JPred filters in FASTA
[TXT]jp_uTwmiN0.full_MSA.fasta.withGaps.html2015-04-17 21:54 8.7KFull MSA before JPred filters in FASTA
[ ]jp_uTwmiN0.hmm2015-04-17 21:54 28KHHMer2 profile of the alignment
[TXT]jp_uTwmiN0.html2015-04-17 21:54 20KHTML prediction and alignment data
[ ]jp_uTwmiN0.input2015-04-17 19:20 156 Raw input data for analysis
[ ]jp_uTwmiN0.jalview2015-04-17 21:54 3.8KJalview annotation file for alignment
[ ]jp_uTwmiN0.jnet2015-04-17 21:54 5.5KJnet secondary structure output
[TXT]jp_uTwmiN0.profile2015-04-17 21:52 24KPSIBLAST profile from alignment
[ ]jp_uTwmiN0.pssm2015-04-17 21:54 32KPSIBLAST PSSM for Jnet
[TXT]jp_uTwmiN0.results.html2016-02-15 12:20 71KJPred results page
[TXT]jp_uTwmiN0.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_uTwmiN0.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_uTwmiN0.seq2015-04-17 19:20 164 Sequence data file
[TXT]jp_uTwmiN0.simple.html2015-04-17 21:54 1.4KBrief HTML: sequence and prediction only
[TXT]jp_uTwmiN0.svg.html2015-04-17 21:55 63KJalview SVG summary of results
[ ]jp_uTwmiN0.tar.gz2015-04-17 21:55 70KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.