JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2iafa1.name2015-04-17 15:40 0 Job name flag file
[ ]jp__j2ZLpn.align2015-04-17 15:54 155KPSIBLAST alignment in FASTA format
[TXT]jp__j2ZLpn.als2015-04-17 15:54 2.6KAlscript command file for PS/PDF output
[ ]jp__j2ZLpn.blast.gz2015-04-17 15:54 1.5MCompressed PSIBLAST output file
[TXT]jp__j2ZLpn.coils.csv2015-04-17 15:54 870 COILS output in CSV format
[ ]jp__j2ZLpn.coilseq.lupas_142015-04-17 15:54 5.9KCOILS output, window length 14
[ ]jp__j2ZLpn.coilseq.lupas_212015-04-17 15:54 5.9KCOILS output, window length 21
[ ]jp__j2ZLpn.coilseq.lupas_282015-04-17 15:54 5.9KCOILS output, window length 28
[ ]jp__j2ZLpn.concise2015-04-17 15:54 303KPrediction: coiled-coil, solvent, alignment
[ ]jp__j2ZLpn.concise.blc2015-04-17 15:54 156KBLC format prediction and alignment data
[ ]jp__j2ZLpn.concise.fasta2015-04-17 15:54 157KPrediction: coiled-coil, solvent, alignment
[ ]jp__j2ZLpn.concise.pdf2015-04-17 15:55 1.0MPDF prediction and alignment data
[ ]jp__j2ZLpn.concise.ps2015-04-17 15:54 18MPrediction: coiled-coil, solvent, alignment
[ ]jp__j2ZLpn.fasta2015-04-17 15:51 154 Input query sequence in FASTA format
[ ]jp__j2ZLpn.full_MSA.fasta2015-04-17 15:54 2.7MFull MSA before JPred filters in FASTA
[TXT]jp__j2ZLpn.full_MSA.fasta.noGaps.html2015-04-17 15:55 690KFull MSA before JPred filters in FASTA
[TXT]jp__j2ZLpn.full_MSA.fasta.withGaps.html2015-04-17 15:55 8.6MFull MSA before JPred filters in FASTA
[ ]jp__j2ZLpn.hmm2015-04-17 15:54 26KHHMer2 profile of the alignment
[TXT]jp__j2ZLpn.html2015-04-17 15:54 359KHTML prediction and alignment data
[ ]jp__j2ZLpn.input2015-04-17 15:40 147 Raw input data for analysis
[ ]jp__j2ZLpn.jalview2015-04-17 15:54 3.6KJalview annotation file for alignment
[ ]jp__j2ZLpn.jnet2015-04-17 15:54 5.2KJnet secondary structure output
[TXT]jp__j2ZLpn.profile2015-04-17 15:53 23KPSIBLAST profile from alignment
[ ]jp__j2ZLpn.pssm2015-04-17 15:54 30KPSIBLAST PSSM for Jnet
[TXT]jp__j2ZLpn.results.html2016-02-15 12:20 65KJPred results page
[TXT]jp__j2ZLpn.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp__j2ZLpn.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp__j2ZLpn.seq2015-04-17 15:40 154 Sequence data file
[TXT]jp__j2ZLpn.simple.html2015-04-17 15:54 1.4KBrief HTML: sequence and prediction only
[TXT]jp__j2ZLpn.svg.html2015-04-17 15:55 57KJalview SVG summary of results
[ ]jp__j2ZLpn.tar.gz2015-04-17 15:55 3.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.