JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2ivya_.name2015-04-17 17:31 0 Job name flag file
[ ]jp_UACLnTs.align2015-04-17 18:53 128KPSIBLAST alignment in FASTA format
[TXT]jp_UACLnTs.als2015-04-17 18:53 2.2KAlscript command file for PS/PDF output
[ ]jp_UACLnTs.blast.gz2015-04-17 18:51 248KCompressed PSIBLAST output file
[TXT]jp_UACLnTs.coils.csv2015-04-17 18:53 558 COILS output in CSV format
[ ]jp_UACLnTs.coilseq.lupas_142015-04-17 18:53 3.7KCOILS output, window length 14
[ ]jp_UACLnTs.coilseq.lupas_212015-04-17 18:53 3.7KCOILS output, window length 21
[ ]jp_UACLnTs.coilseq.lupas_282015-04-17 18:53 3.7KCOILS output, window length 28
[ ]jp_UACLnTs.concise2015-04-17 18:53 243KPrediction: coiled-coil, solvent, alignment
[ ]jp_UACLnTs.concise.blc2015-04-17 18:53 127KBLC format prediction and alignment data
[ ]jp_UACLnTs.concise.fasta2015-04-17 18:53 129KPrediction: coiled-coil, solvent, alignment
[ ]jp_UACLnTs.concise.pdf2015-04-17 18:53 796KPDF prediction and alignment data
[ ]jp_UACLnTs.concise.ps2015-04-17 18:53 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_UACLnTs.fasta2015-04-17 18:45 102 Input query sequence in FASTA format
[ ]jp_UACLnTs.full_MSA.fasta2015-04-17 18:51 419KFull MSA before JPred filters in FASTA
[TXT]jp_UACLnTs.full_MSA.fasta.noGaps.html2015-04-17 18:53 351KFull MSA before JPred filters in FASTA
[TXT]jp_UACLnTs.full_MSA.fasta.withGaps.html2015-04-17 18:53 2.2MFull MSA before JPred filters in FASTA
[ ]jp_UACLnTs.hmm2015-04-17 18:53 17KHHMer2 profile of the alignment
[TXT]jp_UACLnTs.html2015-04-17 18:53 369KHTML prediction and alignment data
[ ]jp_UACLnTs.input2015-04-17 17:31 95 Raw input data for analysis
[ ]jp_UACLnTs.jalview2015-04-17 18:53 2.6KJalview annotation file for alignment
[ ]jp_UACLnTs.jnet2015-04-17 18:53 3.3KJnet secondary structure output
[TXT]jp_UACLnTs.profile2015-04-17 18:49 14KPSIBLAST profile from alignment
[ ]jp_UACLnTs.pssm2015-04-17 18:53 19KPSIBLAST PSSM for Jnet
[TXT]jp_UACLnTs.results.html2016-02-15 12:20 45KJPred results page
[TXT]jp_UACLnTs.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_UACLnTs.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_UACLnTs.seq2015-04-17 17:31 102 Sequence data file
[TXT]jp_UACLnTs.simple.html2015-04-17 18:53 1.2KBrief HTML: sequence and prediction only
[TXT]jp_UACLnTs.svg.html2015-04-17 18:53 37KJalview SVG summary of results
[ ]jp_UACLnTs.tar.gz2015-04-17 18:53 1.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.