JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:56 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2jdia2.name2015-04-17 18:45 0 Job name flag file
[ ]jp_GMkkwkU.align2015-04-17 20:55 48KPSIBLAST alignment in FASTA format
[TXT]jp_GMkkwkU.als2015-04-17 20:55 2.2KAlscript command file for PS/PDF output
[ ]jp_GMkkwkU.blast.gz2015-04-17 20:55 503KCompressed PSIBLAST output file
[TXT]jp_GMkkwkU.coils.csv2015-04-17 20:55 456 COILS output in CSV format
[ ]jp_GMkkwkU.coilseq.lupas_142015-04-17 20:55 3.0KCOILS output, window length 14
[ ]jp_GMkkwkU.coilseq.lupas_212015-04-17 20:55 3.0KCOILS output, window length 21
[ ]jp_GMkkwkU.coilseq.lupas_282015-04-17 20:55 3.0KCOILS output, window length 28
[ ]jp_GMkkwkU.concise2015-04-17 20:55 93KPrediction: coiled-coil, solvent, alignment
[ ]jp_GMkkwkU.concise.blc2015-04-17 20:55 49KBLC format prediction and alignment data
[ ]jp_GMkkwkU.concise.fasta2015-04-17 20:55 49KPrediction: coiled-coil, solvent, alignment
[ ]jp_GMkkwkU.concise.pdf2015-04-17 20:55 296KPDF prediction and alignment data
[ ]jp_GMkkwkU.concise.ps2015-04-17 20:55 5.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_GMkkwkU.fasta2015-04-17 20:48 84 Input query sequence in FASTA format
[ ]jp_GMkkwkU.full_MSA.fasta2015-04-17 20:55 663KFull MSA before JPred filters in FASTA
[TXT]jp_GMkkwkU.full_MSA.fasta.noGaps.html2015-04-17 20:55 540KFull MSA before JPred filters in FASTA
[TXT]jp_GMkkwkU.full_MSA.fasta.withGaps.html2015-04-17 20:55 2.3MFull MSA before JPred filters in FASTA
[ ]jp_GMkkwkU.hmm2015-04-17 20:55 13KHHMer2 profile of the alignment
[TXT]jp_GMkkwkU.html2015-04-17 20:55 162KHTML prediction and alignment data
[ ]jp_GMkkwkU.input2015-04-17 18:45 78 Raw input data for analysis
[ ]jp_GMkkwkU.jalview2015-04-17 20:55 2.2KJalview annotation file for alignment
[ ]jp_GMkkwkU.jnet2015-04-17 20:55 2.7KJnet secondary structure output
[TXT]jp_GMkkwkU.profile2015-04-17 20:53 12KPSIBLAST profile from alignment
[ ]jp_GMkkwkU.pssm2015-04-17 20:55 15KPSIBLAST PSSM for Jnet
[TXT]jp_GMkkwkU.results.html2016-02-15 12:20 39KJPred results page
[TXT]jp_GMkkwkU.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_GMkkwkU.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_GMkkwkU.seq2015-04-17 18:45 84 Sequence data file
[TXT]jp_GMkkwkU.simple.html2015-04-17 20:55 1.2KBrief HTML: sequence and prediction only
[TXT]jp_GMkkwkU.svg.html2015-04-17 20:56 31KJalview SVG summary of results
[ ]jp_GMkkwkU.tar.gz2015-04-17 20:56 1.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.