JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2jdih1.name2015-04-17 18:45 0 Job name flag file
[ ]jp_wq2rqYZ.align2015-04-17 20:53 1.9KPSIBLAST alignment in FASTA format
[TXT]jp_wq2rqYZ.als2015-04-17 20:53 1.8KAlscript command file for PS/PDF output
[ ]jp_wq2rqYZ.blast.gz2015-04-17 20:53 4.3KCompressed PSIBLAST output file
[TXT]jp_wq2rqYZ.coils.csv2015-04-17 20:53 300 COILS output in CSV format
[ ]jp_wq2rqYZ.coilseq.lupas_142015-04-17 20:53 1.9KCOILS output, window length 14
[ ]jp_wq2rqYZ.coilseq.lupas_212015-04-17 20:53 1.9KCOILS output, window length 21
[ ]jp_wq2rqYZ.coilseq.lupas_282015-04-17 20:53 1.9KCOILS output, window length 28
[ ]jp_wq2rqYZ.concise2015-04-17 20:53 5.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_wq2rqYZ.concise.blc2015-04-17 20:53 2.7KBLC format prediction and alignment data
[ ]jp_wq2rqYZ.concise.fasta2015-04-17 20:53 2.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_wq2rqYZ.concise.pdf2015-04-17 20:53 18KPDF prediction and alignment data
[ ]jp_wq2rqYZ.concise.ps2015-04-17 20:53 281KPrediction: coiled-coil, solvent, alignment
[ ]jp_wq2rqYZ.fasta2015-04-17 20:48 58 Input query sequence in FASTA format
[ ]jp_wq2rqYZ.full_MSA.fasta2015-04-17 20:53 3.2KFull MSA before JPred filters in FASTA
[TXT]jp_wq2rqYZ.full_MSA.fasta.noGaps.html2015-04-17 20:53 9.1KFull MSA before JPred filters in FASTA
[TXT]jp_wq2rqYZ.full_MSA.fasta.withGaps.html2015-04-17 20:53 9.1KFull MSA before JPred filters in FASTA
[ ]jp_wq2rqYZ.hmm2015-04-17 20:53 8.4KHHMer2 profile of the alignment
[TXT]jp_wq2rqYZ.html2015-04-17 20:53 16KHTML prediction and alignment data
[ ]jp_wq2rqYZ.input2015-04-17 18:45 52 Raw input data for analysis
[ ]jp_wq2rqYZ.jalview2015-04-17 20:53 1.7KJalview annotation file for alignment
[ ]jp_wq2rqYZ.jnet2015-04-17 20:53 1.7KJnet secondary structure output
[TXT]jp_wq2rqYZ.profile2015-04-17 20:52 7.6KPSIBLAST profile from alignment
[ ]jp_wq2rqYZ.pssm2015-04-17 20:53 9.7KPSIBLAST PSSM for Jnet
[TXT]jp_wq2rqYZ.results.html2016-02-15 12:20 30KJPred results page
[TXT]jp_wq2rqYZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_wq2rqYZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_wq2rqYZ.seq2015-04-17 18:45 58 Sequence data file
[TXT]jp_wq2rqYZ.simple.html2015-04-17 20:53 1.0KBrief HTML: sequence and prediction only
[TXT]jp_wq2rqYZ.svg.html2015-04-17 20:53 22KJalview SVG summary of results
[ ]jp_wq2rqYZ.tar.gz2015-04-17 20:53 42KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.