JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2mcma_.name2015-04-17 15:42 0 Job name flag file
[ ]jp_bKUMeMT.align2015-04-17 15:55 7.3KPSIBLAST alignment in FASTA format
[TXT]jp_bKUMeMT.als2015-04-17 15:55 2.4KAlscript command file for PS/PDF output
[ ]jp_bKUMeMT.blast.gz2015-04-17 15:55 14KCompressed PSIBLAST output file
[TXT]jp_bKUMeMT.coils.csv2015-04-17 15:55 702 COILS output in CSV format
[ ]jp_bKUMeMT.coilseq.lupas_142015-04-17 15:55 4.7KCOILS output, window length 14
[ ]jp_bKUMeMT.coilseq.lupas_212015-04-17 15:55 4.7KCOILS output, window length 21
[ ]jp_bKUMeMT.coilseq.lupas_282015-04-17 15:55 4.7KCOILS output, window length 28
[ ]jp_bKUMeMT.concise2015-04-17 15:55 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_bKUMeMT.concise.blc2015-04-17 15:55 8.9KBLC format prediction and alignment data
[ ]jp_bKUMeMT.concise.fasta2015-04-17 15:55 8.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_bKUMeMT.concise.pdf2015-04-17 15:55 55KPDF prediction and alignment data
[ ]jp_bKUMeMT.concise.ps2015-04-17 15:55 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_bKUMeMT.fasta2015-04-17 15:53 126 Input query sequence in FASTA format
[ ]jp_bKUMeMT.full_MSA.fasta2015-04-17 15:55 19KFull MSA before JPred filters in FASTA
[TXT]jp_bKUMeMT.full_MSA.fasta.noGaps.html2015-04-17 15:55 16KFull MSA before JPred filters in FASTA
[TXT]jp_bKUMeMT.full_MSA.fasta.withGaps.html2015-04-17 15:55 77KFull MSA before JPred filters in FASTA
[ ]jp_bKUMeMT.hmm2015-04-17 15:55 21KHHMer2 profile of the alignment
[TXT]jp_bKUMeMT.html2015-04-17 15:55 29KHTML prediction and alignment data
[ ]jp_bKUMeMT.input2015-04-17 15:42 119 Raw input data for analysis
[ ]jp_bKUMeMT.jalview2015-04-17 15:55 3.0KJalview annotation file for alignment
[ ]jp_bKUMeMT.jnet2015-04-17 15:55 4.2KJnet secondary structure output
[TXT]jp_bKUMeMT.profile2015-04-17 15:54 18KPSIBLAST profile from alignment
[ ]jp_bKUMeMT.pssm2015-04-17 15:55 24KPSIBLAST PSSM for Jnet
[TXT]jp_bKUMeMT.results.html2016-02-15 12:20 54KJPred results page
[TXT]jp_bKUMeMT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_bKUMeMT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_bKUMeMT.seq2015-04-17 15:42 126 Sequence data file
[TXT]jp_bKUMeMT.simple.html2015-04-17 15:55 1.3KBrief HTML: sequence and prediction only
[TXT]jp_bKUMeMT.svg.html2015-04-17 15:55 46KJalview SVG summary of results
[ ]jp_bKUMeMT.tar.gz2015-04-17 15:55 122KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.