JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2nnua_.name2015-04-17 18:45 0 Job name flag file
[ ]jp_s9eIjwe.align2015-04-17 20:54 49KPSIBLAST alignment in FASTA format
[TXT]jp_s9eIjwe.als2015-04-17 20:55 3.4KAlscript command file for PS/PDF output
[ ]jp_s9eIjwe.blast.gz2015-04-17 20:54 128KCompressed PSIBLAST output file
[TXT]jp_s9eIjwe.coils.csv2015-04-17 20:54 1.2KCOILS output in CSV format
[ ]jp_s9eIjwe.coilseq.lupas_142015-04-17 20:54 8.4KCOILS output, window length 14
[ ]jp_s9eIjwe.coilseq.lupas_212015-04-17 20:54 8.4KCOILS output, window length 21
[ ]jp_s9eIjwe.coilseq.lupas_282015-04-17 20:54 8.4KCOILS output, window length 28
[ ]jp_s9eIjwe.concise2015-04-17 20:54 103KPrediction: coiled-coil, solvent, alignment
[ ]jp_s9eIjwe.concise.blc2015-04-17 20:55 51KBLC format prediction and alignment data
[ ]jp_s9eIjwe.concise.fasta2015-04-17 20:55 51KPrediction: coiled-coil, solvent, alignment
[ ]jp_s9eIjwe.concise.pdf2015-04-17 20:55 343KPDF prediction and alignment data
[ ]jp_s9eIjwe.concise.ps2015-04-17 20:55 6.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_s9eIjwe.fasta2015-04-17 20:49 216 Input query sequence in FASTA format
[ ]jp_s9eIjwe.full_MSA.fasta2015-04-17 20:54 110KFull MSA before JPred filters in FASTA
[TXT]jp_s9eIjwe.full_MSA.fasta.noGaps.html2015-04-17 20:55 107KFull MSA before JPred filters in FASTA
[TXT]jp_s9eIjwe.full_MSA.fasta.withGaps.html2015-04-17 20:55 455KFull MSA before JPred filters in FASTA
[ ]jp_s9eIjwe.hmm2015-04-17 20:54 38KHHMer2 profile of the alignment
[TXT]jp_s9eIjwe.html2015-04-17 20:55 114KHTML prediction and alignment data
[ ]jp_s9eIjwe.input2015-04-17 18:45 208 Raw input data for analysis
[ ]jp_s9eIjwe.jalview2015-04-17 20:55 4.9KJalview annotation file for alignment
[ ]jp_s9eIjwe.jnet2015-04-17 20:54 7.4KJnet secondary structure output
[TXT]jp_s9eIjwe.profile2015-04-17 20:53 32KPSIBLAST profile from alignment
[ ]jp_s9eIjwe.pssm2015-04-17 20:54 43KPSIBLAST PSSM for Jnet
[TXT]jp_s9eIjwe.results.html2016-02-15 12:20 89KJPred results page
[TXT]jp_s9eIjwe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_s9eIjwe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_s9eIjwe.seq2015-04-17 18:45 216 Sequence data file
[TXT]jp_s9eIjwe.simple.html2015-04-17 20:55 1.6KBrief HTML: sequence and prediction only
[TXT]jp_s9eIjwe.svg.html2015-04-17 20:55 81KJalview SVG summary of results
[ ]jp_s9eIjwe.tar.gz2015-04-17 20:55 682KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.