JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:02 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2nuga2.name2015-04-17 19:23 0 Job name flag file
[ ]jp_57LJLwX.align2015-04-17 22:01 62KPSIBLAST alignment in FASTA format
[TXT]jp_57LJLwX.als2015-04-17 22:01 1.9KAlscript command file for PS/PDF output
[ ]jp_57LJLwX.blast.gz2015-04-17 22:01 1.8MCompressed PSIBLAST output file
[TXT]jp_57LJLwX.coils.csv2015-04-17 22:01 438 COILS output in CSV format
[ ]jp_57LJLwX.coilseq.lupas_142015-04-17 22:01 2.9KCOILS output, window length 14
[ ]jp_57LJLwX.coilseq.lupas_212015-04-17 22:01 2.9KCOILS output, window length 21
[ ]jp_57LJLwX.coilseq.lupas_282015-04-17 22:01 2.9KCOILS output, window length 28
[ ]jp_57LJLwX.concise2015-04-17 22:01 120KPrediction: coiled-coil, solvent, alignment
[ ]jp_57LJLwX.concise.blc2015-04-17 22:01 63KBLC format prediction and alignment data
[ ]jp_57LJLwX.concise.fasta2015-04-17 22:01 63KPrediction: coiled-coil, solvent, alignment
[ ]jp_57LJLwX.concise.pdf2015-04-17 22:01 371KPDF prediction and alignment data
[ ]jp_57LJLwX.concise.ps2015-04-17 22:01 6.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_57LJLwX.fasta2015-04-17 21:54 81 Input query sequence in FASTA format
[ ]jp_57LJLwX.full_MSA.fasta2015-04-17 22:01 3.8MFull MSA before JPred filters in FASTA
[TXT]jp_57LJLwX.full_MSA.fasta.noGaps.html2015-04-17 22:02 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_57LJLwX.full_MSA.fasta.withGaps.html2015-04-17 22:02 14MFull MSA before JPred filters in FASTA
[ ]jp_57LJLwX.hmm2015-04-17 22:01 13KHHMer2 profile of the alignment
[TXT]jp_57LJLwX.html2015-04-17 22:01 213KHTML prediction and alignment data
[ ]jp_57LJLwX.input2015-04-17 19:23 75 Raw input data for analysis
[ ]jp_57LJLwX.jalview2015-04-17 22:01 2.2KJalview annotation file for alignment
[ ]jp_57LJLwX.jnet2015-04-17 22:01 2.6KJnet secondary structure output
[TXT]jp_57LJLwX.profile2015-04-17 21:58 11KPSIBLAST profile from alignment
[ ]jp_57LJLwX.pssm2015-04-17 22:01 15KPSIBLAST PSSM for Jnet
[TXT]jp_57LJLwX.results.html2016-02-15 12:20 38KJPred results page
[TXT]jp_57LJLwX.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_57LJLwX.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_57LJLwX.seq2015-04-17 19:23 81 Sequence data file
[TXT]jp_57LJLwX.simple.html2015-04-17 22:01 1.1KBrief HTML: sequence and prediction only
[TXT]jp_57LJLwX.svg.html2015-04-17 22:02 30KJalview SVG summary of results
[ ]jp_57LJLwX.tar.gz2015-04-17 22:02 3.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.