JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:00 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2o9sa_.name2015-04-17 16:56 0 Job name flag file
[ ]jp_POXa8UL.align2015-04-17 18:00 50KPSIBLAST alignment in FASTA format
[TXT]jp_POXa8UL.als2015-04-17 18:00 1.9KAlscript command file for PS/PDF output
[ ]jp_POXa8UL.blast.gz2015-04-17 17:59 4.6MCompressed PSIBLAST output file
[TXT]jp_POXa8UL.coils.csv2015-04-17 18:00 432 COILS output in CSV format
[ ]jp_POXa8UL.coilseq.lupas_142015-04-17 18:00 2.8KCOILS output, window length 14
[ ]jp_POXa8UL.coilseq.lupas_212015-04-17 18:00 2.8KCOILS output, window length 21
[ ]jp_POXa8UL.coilseq.lupas_282015-04-17 18:00 2.8KCOILS output, window length 28
[ ]jp_POXa8UL.concise2015-04-17 18:00 96KPrediction: coiled-coil, solvent, alignment
[ ]jp_POXa8UL.concise.blc2015-04-17 18:00 51KBLC format prediction and alignment data
[ ]jp_POXa8UL.concise.fasta2015-04-17 18:00 51KPrediction: coiled-coil, solvent, alignment
[ ]jp_POXa8UL.concise.pdf2015-04-17 18:00 286KPDF prediction and alignment data
[ ]jp_POXa8UL.concise.ps2015-04-17 18:00 5.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_POXa8UL.fasta2015-04-17 17:53 80 Input query sequence in FASTA format
[ ]jp_POXa8UL.full_MSA.fasta2015-04-17 17:59 11MFull MSA before JPred filters in FASTA
[TXT]jp_POXa8UL.full_MSA.fasta.noGaps.html2015-04-17 18:00 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_POXa8UL.full_MSA.fasta.withGaps.html2015-04-17 18:00 35MFull MSA before JPred filters in FASTA
[ ]jp_POXa8UL.hmm2015-04-17 18:00 13KHHMer2 profile of the alignment
[TXT]jp_POXa8UL.html2015-04-17 18:00 171KHTML prediction and alignment data
[ ]jp_POXa8UL.input2015-04-17 16:56 74 Raw input data for analysis
[ ]jp_POXa8UL.jalview2015-04-17 18:00 2.1KJalview annotation file for alignment
[ ]jp_POXa8UL.jnet2015-04-17 18:00 2.5KJnet secondary structure output
[TXT]jp_POXa8UL.profile2015-04-17 17:58 11KPSIBLAST profile from alignment
[ ]jp_POXa8UL.pssm2015-04-17 18:00 14KPSIBLAST PSSM for Jnet
[TXT]jp_POXa8UL.results.html2016-02-15 12:20 37KJPred results page
[TXT]jp_POXa8UL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_POXa8UL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_POXa8UL.seq2015-04-17 16:56 80 Sequence data file
[TXT]jp_POXa8UL.simple.html2015-04-17 18:00 1.1KBrief HTML: sequence and prediction only
[TXT]jp_POXa8UL.svg.html2015-04-17 18:00 29KJalview SVG summary of results
[ ]jp_POXa8UL.tar.gz2015-04-17 18:00 7.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.