JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2ofca_.name2015-04-17 15:43 0 Job name flag file
[ ]jp_QGGTYoU.align2015-04-17 15:57 5.5KPSIBLAST alignment in FASTA format
[TXT]jp_QGGTYoU.als2015-04-17 15:57 2.9KAlscript command file for PS/PDF output
[ ]jp_QGGTYoU.blast.gz2015-04-17 15:57 13KCompressed PSIBLAST output file
[TXT]jp_QGGTYoU.coils.csv2015-04-17 15:57 876 COILS output in CSV format
[ ]jp_QGGTYoU.coilseq.lupas_142015-04-17 15:57 5.9KCOILS output, window length 14
[ ]jp_QGGTYoU.coilseq.lupas_212015-04-17 15:57 5.9KCOILS output, window length 21
[ ]jp_QGGTYoU.coilseq.lupas_282015-04-17 15:57 5.9KCOILS output, window length 28
[ ]jp_QGGTYoU.concise2015-04-17 15:57 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_QGGTYoU.concise.blc2015-04-17 15:57 7.6KBLC format prediction and alignment data
[ ]jp_QGGTYoU.concise.fasta2015-04-17 15:57 7.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_QGGTYoU.concise.pdf2015-04-17 15:57 82KPDF prediction and alignment data
[ ]jp_QGGTYoU.concise.ps2015-04-17 15:57 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_QGGTYoU.fasta2015-04-17 15:55 155 Input query sequence in FASTA format
[ ]jp_QGGTYoU.full_MSA.fasta2015-04-17 15:57 11KFull MSA before JPred filters in FASTA
[TXT]jp_QGGTYoU.full_MSA.fasta.noGaps.html2015-04-17 15:57 14KFull MSA before JPred filters in FASTA
[TXT]jp_QGGTYoU.full_MSA.fasta.withGaps.html2015-04-17 15:57 53KFull MSA before JPred filters in FASTA
[ ]jp_QGGTYoU.hmm2015-04-17 15:57 26KHHMer2 profile of the alignment
[TXT]jp_QGGTYoU.html2015-04-17 15:57 26KHTML prediction and alignment data
[ ]jp_QGGTYoU.input2015-04-17 15:43 148 Raw input data for analysis
[ ]jp_QGGTYoU.jalview2015-04-17 15:57 3.6KJalview annotation file for alignment
[ ]jp_QGGTYoU.jnet2015-04-17 15:57 5.2KJnet secondary structure output
[TXT]jp_QGGTYoU.profile2015-04-17 15:56 23KPSIBLAST profile from alignment
[ ]jp_QGGTYoU.pssm2015-04-17 15:57 30KPSIBLAST PSSM for Jnet
[TXT]jp_QGGTYoU.results.html2016-02-15 12:20 66KJPred results page
[TXT]jp_QGGTYoU.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_QGGTYoU.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_QGGTYoU.seq2015-04-17 15:43 155 Sequence data file
[TXT]jp_QGGTYoU.simple.html2015-04-17 15:57 1.4KBrief HTML: sequence and prediction only
[TXT]jp_QGGTYoU.svg.html2015-04-17 15:57 58KJalview SVG summary of results
[ ]jp_QGGTYoU.tar.gz2015-04-17 15:57 142KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.