JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2oizd_.name2015-04-17 16:56 0 Job name flag file
[ ]jp_zA41fNl.align2015-04-17 17:55 5.3KPSIBLAST alignment in FASTA format
[TXT]jp_zA41fNl.als2015-04-17 17:55 2.1KAlscript command file for PS/PDF output
[ ]jp_zA41fNl.blast.gz2015-04-17 17:55 23KCompressed PSIBLAST output file
[TXT]jp_zA41fNl.coils.csv2015-04-17 17:55 690 COILS output in CSV format
[ ]jp_zA41fNl.coilseq.lupas_142015-04-17 17:55 4.6KCOILS output, window length 14
[ ]jp_zA41fNl.coilseq.lupas_212015-04-17 17:55 4.6KCOILS output, window length 21
[ ]jp_zA41fNl.coilseq.lupas_282015-04-17 17:55 4.6KCOILS output, window length 28
[ ]jp_zA41fNl.concise2015-04-17 17:55 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_zA41fNl.concise.blc2015-04-17 17:55 7.0KBLC format prediction and alignment data
[ ]jp_zA41fNl.concise.fasta2015-04-17 17:55 6.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_zA41fNl.concise.pdf2015-04-17 17:55 38KPDF prediction and alignment data
[ ]jp_zA41fNl.concise.ps2015-04-17 17:55 752KPrediction: coiled-coil, solvent, alignment
[ ]jp_zA41fNl.fasta2015-04-17 17:53 124 Input query sequence in FASTA format
[ ]jp_zA41fNl.full_MSA.fasta2015-04-17 17:55 17KFull MSA before JPred filters in FASTA
[TXT]jp_zA41fNl.full_MSA.fasta.noGaps.html2015-04-17 17:55 26KFull MSA before JPred filters in FASTA
[TXT]jp_zA41fNl.full_MSA.fasta.withGaps.html2015-04-17 17:55 66KFull MSA before JPred filters in FASTA
[ ]jp_zA41fNl.hmm2015-04-17 17:55 21KHHMer2 profile of the alignment
[TXT]jp_zA41fNl.html2015-04-17 17:55 23KHTML prediction and alignment data
[ ]jp_zA41fNl.input2015-04-17 16:56 117 Raw input data for analysis
[ ]jp_zA41fNl.jalview2015-04-17 17:55 2.9KJalview annotation file for alignment
[ ]jp_zA41fNl.jnet2015-04-17 17:55 4.1KJnet secondary structure output
[TXT]jp_zA41fNl.profile2015-04-17 17:54 18KPSIBLAST profile from alignment
[ ]jp_zA41fNl.pssm2015-04-17 17:55 24KPSIBLAST PSSM for Jnet
[TXT]jp_zA41fNl.results.html2016-02-15 12:20 52KJPred results page
[TXT]jp_zA41fNl.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zA41fNl.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_zA41fNl.seq2015-04-17 16:56 124 Sequence data file
[TXT]jp_zA41fNl.simple.html2015-04-17 17:55 1.2KBrief HTML: sequence and prediction only
[TXT]jp_zA41fNl.svg.html2015-04-17 17:55 44KJalview SVG summary of results
[ ]jp_zA41fNl.tar.gz2015-04-17 17:55 110KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.