JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2ot3a_.name2015-04-17 18:09 0 Job name flag file
[ ]jp_lM_v7RQ.align2015-04-17 19:57 150KPSIBLAST alignment in FASTA format
[TXT]jp_lM_v7RQ.als2015-04-17 19:57 3.1KAlscript command file for PS/PDF output
[ ]jp_lM_v7RQ.blast.gz2015-04-17 19:56 3.5MCompressed PSIBLAST output file
[TXT]jp_lM_v7RQ.coils.csv2015-04-17 19:57 1.5KCOILS output in CSV format
[ ]jp_lM_v7RQ.coilseq.lupas_142015-04-17 19:57 11KCOILS output, window length 14
[ ]jp_lM_v7RQ.coilseq.lupas_212015-04-17 19:57 11KCOILS output, window length 21
[ ]jp_lM_v7RQ.coilseq.lupas_282015-04-17 19:57 11KCOILS output, window length 28
[ ]jp_lM_v7RQ.concise2015-04-17 19:57 301KPrediction: coiled-coil, solvent, alignment
[ ]jp_lM_v7RQ.concise.blc2015-04-17 19:57 151KBLC format prediction and alignment data
[ ]jp_lM_v7RQ.concise.fasta2015-04-17 19:57 152KPrediction: coiled-coil, solvent, alignment
[ ]jp_lM_v7RQ.concise.pdf2015-04-17 19:57 1.0MPDF prediction and alignment data
[ ]jp_lM_v7RQ.concise.ps2015-04-17 19:57 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_lM_v7RQ.fasta2015-04-17 19:51 269 Input query sequence in FASTA format
[ ]jp_lM_v7RQ.full_MSA.fasta2015-04-17 19:56 7.1MFull MSA before JPred filters in FASTA
[TXT]jp_lM_v7RQ.full_MSA.fasta.noGaps.html2015-04-17 19:57 799KFull MSA before JPred filters in FASTA
[TXT]jp_lM_v7RQ.full_MSA.fasta.withGaps.html2015-04-17 19:57 19MFull MSA before JPred filters in FASTA
[ ]jp_lM_v7RQ.hmm2015-04-17 19:57 47KHHMer2 profile of the alignment
[TXT]jp_lM_v7RQ.html2015-04-17 19:57 284KHTML prediction and alignment data
[ ]jp_lM_v7RQ.input2015-04-17 18:09 260 Raw input data for analysis
[ ]jp_lM_v7RQ.jalview2015-04-17 19:57 6.0KJalview annotation file for alignment
[ ]jp_lM_v7RQ.jnet2015-04-17 19:57 9.3KJnet secondary structure output
[TXT]jp_lM_v7RQ.profile2015-04-17 19:55 41KPSIBLAST profile from alignment
[ ]jp_lM_v7RQ.pssm2015-04-17 19:57 54KPSIBLAST PSSM for Jnet
[TXT]jp_lM_v7RQ.results.html2016-02-15 12:20 110KJPred results page
[TXT]jp_lM_v7RQ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_lM_v7RQ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_lM_v7RQ.seq2015-04-17 18:09 269 Sequence data file
[TXT]jp_lM_v7RQ.simple.html2015-04-17 19:57 1.7KBrief HTML: sequence and prediction only
[TXT]jp_lM_v7RQ.svg.html2015-04-17 19:57 101KJalview SVG summary of results
[ ]jp_lM_v7RQ.tar.gz2015-04-17 19:57 6.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.