JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2p62a1.name2015-04-17 16:21 0 Job name flag file
[ ]jp_H0MR_dj.align2015-04-17 16:55 2.8KPSIBLAST alignment in FASTA format
[TXT]jp_H0MR_dj.als2015-04-17 16:55 3.5KAlscript command file for PS/PDF output
[ ]jp_H0MR_dj.blast.gz2015-04-17 16:55 6.2KCompressed PSIBLAST output file
[TXT]jp_H0MR_dj.coils.csv2015-04-17 16:55 1.4KCOILS output in CSV format
[ ]jp_H0MR_dj.coilseq.lupas_142015-04-17 16:55 10KCOILS output, window length 14
[ ]jp_H0MR_dj.coilseq.lupas_212015-04-17 16:55 10KCOILS output, window length 21
[ ]jp_H0MR_dj.coilseq.lupas_282015-04-17 16:55 10KCOILS output, window length 28
[ ]jp_H0MR_dj.concise2015-04-17 16:55 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_H0MR_dj.concise.blc2015-04-17 16:55 6.4KBLC format prediction and alignment data
[ ]jp_H0MR_dj.concise.fasta2015-04-17 16:55 5.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_H0MR_dj.concise.pdf2015-04-17 16:55 47KPDF prediction and alignment data
[ ]jp_H0MR_dj.concise.ps2015-04-17 16:55 794KPrediction: coiled-coil, solvent, alignment
[ ]jp_H0MR_dj.fasta2015-04-17 16:50 257 Input query sequence in FASTA format
[ ]jp_H0MR_dj.full_MSA.fasta2015-04-17 16:55 4.7KFull MSA before JPred filters in FASTA
[TXT]jp_H0MR_dj.full_MSA.fasta.noGaps.html2015-04-17 16:55 6.1KFull MSA before JPred filters in FASTA
[TXT]jp_H0MR_dj.full_MSA.fasta.withGaps.html2015-04-17 16:55 12KFull MSA before JPred filters in FASTA
[ ]jp_H0MR_dj.hmm2015-04-17 16:55 45KHHMer2 profile of the alignment
[TXT]jp_H0MR_dj.html2015-04-17 16:55 31KHTML prediction and alignment data
[ ]jp_H0MR_dj.input2015-04-17 16:21 248 Raw input data for analysis
[ ]jp_H0MR_dj.jalview2015-04-17 16:55 5.7KJalview annotation file for alignment
[ ]jp_H0MR_dj.jnet2015-04-17 16:55 8.8KJnet secondary structure output
[TXT]jp_H0MR_dj.profile2015-04-17 16:54 39KPSIBLAST profile from alignment
[ ]jp_H0MR_dj.pssm2015-04-17 16:55 52KPSIBLAST PSSM for Jnet
[TXT]jp_H0MR_dj.results.html2016-02-15 12:20 106KJPred results page
[TXT]jp_H0MR_dj.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_H0MR_dj.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_H0MR_dj.seq2015-04-17 16:21 257 Sequence data file
[TXT]jp_H0MR_dj.simple.html2015-04-17 16:55 1.7KBrief HTML: sequence and prediction only
[TXT]jp_H0MR_dj.svg.html2015-04-17 16:55 98KJalview SVG summary of results
[ ]jp_H0MR_dj.tar.gz2015-04-17 16:55 110KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.