A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 23:15 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2p8ta2.name | 2015-04-17 18:46 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_oJ_BfQN.align | 2015-04-17 23:15 | 7.5K | PSIBLAST alignment in FASTA format |
| jp_oJ_BfQN.als | 2015-04-17 23:15 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_oJ_BfQN.blast.gz | 2015-04-17 23:15 | 14K | Compressed PSIBLAST output file |
| jp_oJ_BfQN.coils.csv | 2015-04-17 23:15 | 732 | COILS output in CSV format |
| jp_oJ_BfQN.coilseq.lupas_14 | 2015-04-17 23:15 | 4.9K | COILS output, window length 14 |
| jp_oJ_BfQN.coilseq.lupas_21 | 2015-04-17 23:15 | 4.9K | COILS output, window length 21 |
| jp_oJ_BfQN.coilseq.lupas_28 | 2015-04-17 23:15 | 4.9K | COILS output, window length 28 |
| jp_oJ_BfQN.concise | 2015-04-17 23:15 | 19K | Prediction: coiled-coil, solvent, alignment |
| jp_oJ_BfQN.concise.blc | 2015-04-17 23:15 | 9.2K | BLC format prediction and alignment data |
| jp_oJ_BfQN.concise.fasta | 2015-04-17 23:15 | 8.7K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_oJ_BfQN.concise.pdf | 2015-04-17 23:15 | 57K | PDF prediction and alignment data |
| jp_oJ_BfQN.concise.ps | 2015-04-17 23:15 | 1.0M | Prediction: coiled-coil, solvent, alignment |
| jp_oJ_BfQN.fasta | 2015-04-17 20:49 | 131 | Input query sequence in FASTA format |
| jp_oJ_BfQN.full_MSA.fasta | 2015-04-17 23:15 | 16K | Full MSA before JPred filters in FASTA |
| jp_oJ_BfQN.full_MSA.fasta.noGaps.html | 2015-04-17 23:15 | 16K | Full MSA before JPred filters in FASTA |
| jp_oJ_BfQN.full_MSA.fasta.withGaps.html | 2015-04-17 23:15 | 80K | Full MSA before JPred filters in FASTA |
| jp_oJ_BfQN.hmm | 2015-04-17 23:15 | 22K | HHMer2 profile of the alignment |
| jp_oJ_BfQN.html | 2015-04-17 23:15 | 31K | HTML prediction and alignment data |
| jp_oJ_BfQN.input | 2015-04-17 18:46 | 124 | Raw input data for analysis |
| jp_oJ_BfQN.jalview | 2015-04-17 23:15 | 3.2K | Jalview annotation file for alignment |
| jp_oJ_BfQN.jnet | 2015-04-17 23:15 | 4.3K | Jnet secondary structure output |
| jp_oJ_BfQN.profile | 2015-04-17 22:44 | 19K | PSIBLAST profile from alignment |
| jp_oJ_BfQN.pssm | 2015-04-17 23:15 | 25K | PSIBLAST PSSM for Jnet |
| jp_oJ_BfQN.results.html | 2016-02-15 12:20 | 57K | JPred results page |
| jp_oJ_BfQN.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_oJ_BfQN.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_oJ_BfQN.seq | 2015-04-17 18:46 | 131 | Sequence data file |
| jp_oJ_BfQN.simple.html | 2015-04-17 23:15 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_oJ_BfQN.svg.html) | jp_oJ_BfQN.svg.html | 2015-04-17 23:15 | 49K | Jalview SVG summary of results |
| jp_oJ_BfQN.tar.gz | 2015-04-17 23:15 | 130K | Archive containing complete results |
