JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:02 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2pstx_.name2015-04-17 16:57 0 Job name flag file
[ ]jp_6kT0w4P.align2015-04-17 18:02 58KPSIBLAST alignment in FASTA format
[TXT]jp_6kT0w4P.als2015-04-17 18:02 1.9KAlscript command file for PS/PDF output
[ ]jp_6kT0w4P.blast.gz2015-04-17 18:02 177KCompressed PSIBLAST output file
[TXT]jp_6kT0w4P.coils.csv2015-04-17 18:02 396 COILS output in CSV format
[ ]jp_6kT0w4P.coilseq.lupas_142015-04-17 18:02 2.6KCOILS output, window length 14
[ ]jp_6kT0w4P.coilseq.lupas_212015-04-17 18:02 2.6KCOILS output, window length 21
[ ]jp_6kT0w4P.coilseq.lupas_282015-04-17 18:02 2.6KCOILS output, window length 28
[ ]jp_6kT0w4P.concise2015-04-17 18:02 109KPrediction: coiled-coil, solvent, alignment
[ ]jp_6kT0w4P.concise.blc2015-04-17 18:02 58KBLC format prediction and alignment data
[ ]jp_6kT0w4P.concise.fasta2015-04-17 18:02 58KPrediction: coiled-coil, solvent, alignment
[ ]jp_6kT0w4P.concise.pdf2015-04-17 18:02 319KPDF prediction and alignment data
[ ]jp_6kT0w4P.concise.ps2015-04-17 18:02 5.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_6kT0w4P.fasta2015-04-17 17:55 74 Input query sequence in FASTA format
[ ]jp_6kT0w4P.full_MSA.fasta2015-04-17 18:02 151KFull MSA before JPred filters in FASTA
[TXT]jp_6kT0w4P.full_MSA.fasta.noGaps.html2015-04-17 18:02 227KFull MSA before JPred filters in FASTA
[TXT]jp_6kT0w4P.full_MSA.fasta.withGaps.html2015-04-17 18:02 684KFull MSA before JPred filters in FASTA
[ ]jp_6kT0w4P.hmm2015-04-17 18:02 11KHHMer2 profile of the alignment
[TXT]jp_6kT0w4P.html2015-04-17 18:02 204KHTML prediction and alignment data
[ ]jp_6kT0w4P.input2015-04-17 16:57 68 Raw input data for analysis
[ ]jp_6kT0w4P.jalview2015-04-17 18:02 2.0KJalview annotation file for alignment
[ ]jp_6kT0w4P.jnet2015-04-17 18:02 2.3KJnet secondary structure output
[TXT]jp_6kT0w4P.profile2015-04-17 18:00 10KPSIBLAST profile from alignment
[ ]jp_6kT0w4P.pssm2015-04-17 18:02 13KPSIBLAST PSSM for Jnet
[TXT]jp_6kT0w4P.results.html2016-02-15 12:20 35KJPred results page
[TXT]jp_6kT0w4P.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_6kT0w4P.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_6kT0w4P.seq2015-04-17 16:57 74 Sequence data file
[TXT]jp_6kT0w4P.simple.html2015-04-17 18:02 1.1KBrief HTML: sequence and prediction only
[TXT]jp_6kT0w4P.svg.html2015-04-17 18:02 27KJalview SVG summary of results
[ ]jp_6kT0w4P.tar.gz2015-04-17 18:02 673KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.