JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2pv4a1.name2015-04-17 16:22 0 Job name flag file
[ ]jp_YGxYGwz.align2015-04-17 16:55 4.3KPSIBLAST alignment in FASTA format
[TXT]jp_YGxYGwz.als2015-04-17 16:55 2.1KAlscript command file for PS/PDF output
[ ]jp_YGxYGwz.blast.gz2015-04-17 16:55 7.8KCompressed PSIBLAST output file
[TXT]jp_YGxYGwz.coils.csv2015-04-17 16:55 894 COILS output in CSV format
[ ]jp_YGxYGwz.coilseq.lupas_142015-04-17 16:55 6.0KCOILS output, window length 14
[ ]jp_YGxYGwz.coilseq.lupas_212015-04-17 16:55 6.0KCOILS output, window length 21
[ ]jp_YGxYGwz.coilseq.lupas_282015-04-17 16:55 6.0KCOILS output, window length 28
[ ]jp_YGxYGwz.concise2015-04-17 16:55 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_YGxYGwz.concise.blc2015-04-17 16:55 6.5KBLC format prediction and alignment data
[ ]jp_YGxYGwz.concise.fasta2015-04-17 16:55 5.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_YGxYGwz.concise.pdf2015-04-17 16:55 43KPDF prediction and alignment data
[ ]jp_YGxYGwz.concise.ps2015-04-17 16:55 778KPrediction: coiled-coil, solvent, alignment
[ ]jp_YGxYGwz.fasta2015-04-17 16:51 159 Input query sequence in FASTA format
[ ]jp_YGxYGwz.full_MSA.fasta2015-04-17 16:55 9.8KFull MSA before JPred filters in FASTA
[TXT]jp_YGxYGwz.full_MSA.fasta.noGaps.html2015-04-17 16:55 14KFull MSA before JPred filters in FASTA
[TXT]jp_YGxYGwz.full_MSA.fasta.withGaps.html2015-04-17 16:55 30KFull MSA before JPred filters in FASTA
[ ]jp_YGxYGwz.hmm2015-04-17 16:55 27KHHMer2 profile of the alignment
[TXT]jp_YGxYGwz.html2015-04-17 16:55 27KHTML prediction and alignment data
[ ]jp_YGxYGwz.input2015-04-17 16:22 151 Raw input data for analysis
[ ]jp_YGxYGwz.jalview2015-04-17 16:55 3.8KJalview annotation file for alignment
[ ]jp_YGxYGwz.jnet2015-04-17 16:55 5.3KJnet secondary structure output
[TXT]jp_YGxYGwz.profile2015-04-17 16:54 23KPSIBLAST profile from alignment
[ ]jp_YGxYGwz.pssm2015-04-17 16:55 31KPSIBLAST PSSM for Jnet
[TXT]jp_YGxYGwz.results.html2016-02-15 12:20 66KJPred results page
[TXT]jp_YGxYGwz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_YGxYGwz.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_YGxYGwz.seq2015-04-17 16:22 159 Sequence data file
[TXT]jp_YGxYGwz.simple.html2015-04-17 16:55 1.3KBrief HTML: sequence and prediction only
[TXT]jp_YGxYGwz.svg.html2015-04-17 16:55 58KJalview SVG summary of results
[ ]jp_YGxYGwz.tar.gz2015-04-17 16:55 95KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.