A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 23:23 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2q2ga1.name | 2015-04-17 18:46 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_CprlGnQ.align | 2015-04-17 23:22 | 80K | PSIBLAST alignment in FASTA format |
| jp_CprlGnQ.als | 2015-04-17 23:22 | 2.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_CprlGnQ.blast.gz | 2015-04-17 23:21 | 3.1M | Compressed PSIBLAST output file |
| jp_CprlGnQ.coils.csv | 2015-04-17 23:22 | 528 | COILS output in CSV format |
| jp_CprlGnQ.coilseq.lupas_14 | 2015-04-17 23:22 | 3.5K | COILS output, window length 14 |
| jp_CprlGnQ.coilseq.lupas_21 | 2015-04-17 23:22 | 3.5K | COILS output, window length 21 |
| jp_CprlGnQ.coilseq.lupas_28 | 2015-04-17 23:22 | 3.5K | COILS output, window length 28 |
| jp_CprlGnQ.concise | 2015-04-17 23:22 | 153K | Prediction: coiled-coil, solvent, alignment |
| jp_CprlGnQ.concise.blc | 2015-04-17 23:22 | 80K | BLC format prediction and alignment data |
| jp_CprlGnQ.concise.fasta | 2015-04-17 23:22 | 81K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_CprlGnQ.concise.pdf | 2015-04-17 23:22 | 486K | PDF prediction and alignment data |
| jp_CprlGnQ.concise.ps | 2015-04-17 23:22 | 8.6M | Prediction: coiled-coil, solvent, alignment |
| jp_CprlGnQ.fasta | 2015-04-17 20:49 | 97 | Input query sequence in FASTA format |
| jp_CprlGnQ.full_MSA.fasta | 2015-04-17 23:21 | 8.3M | Full MSA before JPred filters in FASTA |
| jp_CprlGnQ.full_MSA.fasta.noGaps.html | 2015-04-17 23:22 | 1.6M | Full MSA before JPred filters in FASTA |
| jp_CprlGnQ.full_MSA.fasta.withGaps.html | 2015-04-17 23:22 | 21M | Full MSA before JPred filters in FASTA |
| jp_CprlGnQ.hmm | 2015-04-17 23:22 | 16K | HHMer2 profile of the alignment |
| jp_CprlGnQ.html | 2015-04-17 23:22 | 240K | HTML prediction and alignment data |
| jp_CprlGnQ.input | 2015-04-17 18:46 | 90 | Raw input data for analysis |
| jp_CprlGnQ.jalview | 2015-04-17 23:22 | 2.5K | Jalview annotation file for alignment |
| jp_CprlGnQ.jnet | 2015-04-17 23:22 | 3.1K | Jnet secondary structure output |
| jp_CprlGnQ.profile | 2015-04-17 23:19 | 14K | PSIBLAST profile from alignment |
| jp_CprlGnQ.pssm | 2015-04-17 23:22 | 18K | PSIBLAST PSSM for Jnet |
| jp_CprlGnQ.results.html | 2016-02-15 12:20 | 42K | JPred results page |
| jp_CprlGnQ.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_CprlGnQ.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_CprlGnQ.seq | 2015-04-17 18:46 | 97 | Sequence data file |
| jp_CprlGnQ.simple.html | 2015-04-17 23:22 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_CprlGnQ.svg.html) | jp_CprlGnQ.svg.html | 2015-04-17 23:22 | 34K | Jalview SVG summary of results |
| jp_CprlGnQ.tar.gz | 2015-04-17 23:23 | 5.6M | Archive containing complete results |
