JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:24 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2qn6b_.name2015-04-17 18:22 0 Job name flag file
[ ]jp_RHthz8P.align2015-04-17 22:24 31KPSIBLAST alignment in FASTA format
[TXT]jp_RHthz8P.als2015-04-17 22:24 2.1KAlscript command file for PS/PDF output
[ ]jp_RHthz8P.blast.gz2015-04-17 22:24 56KCompressed PSIBLAST output file
[TXT]jp_RHthz8P.coils.csv2015-04-17 22:24 570 COILS output in CSV format
[ ]jp_RHthz8P.coilseq.lupas_142015-04-17 22:24 3.8KCOILS output, window length 14
[ ]jp_RHthz8P.coilseq.lupas_212015-04-17 22:24 3.8KCOILS output, window length 21
[ ]jp_RHthz8P.coilseq.lupas_282015-04-17 22:24 3.8KCOILS output, window length 28
[ ]jp_RHthz8P.concise2015-04-17 22:24 61KPrediction: coiled-coil, solvent, alignment
[ ]jp_RHthz8P.concise.blc2015-04-17 22:24 31KBLC format prediction and alignment data
[ ]jp_RHthz8P.concise.fasta2015-04-17 22:24 32KPrediction: coiled-coil, solvent, alignment
[ ]jp_RHthz8P.concise.pdf2015-04-17 22:24 203KPDF prediction and alignment data
[ ]jp_RHthz8P.concise.ps2015-04-17 22:24 3.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_RHthz8P.fasta2015-04-17 20:12 104 Input query sequence in FASTA format
[ ]jp_RHthz8P.full_MSA.fasta2015-04-17 22:24 92KFull MSA before JPred filters in FASTA
[TXT]jp_RHthz8P.full_MSA.fasta.noGaps.html2015-04-17 22:24 101KFull MSA before JPred filters in FASTA
[TXT]jp_RHthz8P.full_MSA.fasta.withGaps.html2015-04-17 22:24 300KFull MSA before JPred filters in FASTA
[ ]jp_RHthz8P.hmm2015-04-17 22:24 17KHHMer2 profile of the alignment
[TXT]jp_RHthz8P.html2015-04-17 22:24 97KHTML prediction and alignment data
[ ]jp_RHthz8P.input2015-04-17 18:22 97 Raw input data for analysis
[ ]jp_RHthz8P.jalview2015-04-17 22:24 2.7KJalview annotation file for alignment
[ ]jp_RHthz8P.jnet2015-04-17 22:24 3.4KJnet secondary structure output
[TXT]jp_RHthz8P.profile2015-04-17 22:14 15KPSIBLAST profile from alignment
[ ]jp_RHthz8P.pssm2015-04-17 22:24 19KPSIBLAST PSSM for Jnet
[TXT]jp_RHthz8P.results.html2016-02-15 12:20 46KJPred results page
[TXT]jp_RHthz8P.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RHthz8P.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RHthz8P.seq2015-04-17 18:22 104 Sequence data file
[TXT]jp_RHthz8P.simple.html2015-04-17 22:24 1.2KBrief HTML: sequence and prediction only
[TXT]jp_RHthz8P.svg.html2015-04-17 22:24 38KJalview SVG summary of results
[ ]jp_RHthz8P.tar.gz2015-04-17 22:24 374KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.