JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:00 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2rdea1.name2015-04-17 16:58 0 Job name flag file
[ ]jp_jk3L1c0.align2015-04-17 18:00 17KPSIBLAST alignment in FASTA format
[TXT]jp_jk3L1c0.als2015-04-17 18:00 2.5KAlscript command file for PS/PDF output
[ ]jp_jk3L1c0.blast.gz2015-04-17 18:00 30KCompressed PSIBLAST output file
[TXT]jp_jk3L1c0.coils.csv2015-04-17 18:00 690 COILS output in CSV format
[ ]jp_jk3L1c0.coilseq.lupas_142015-04-17 18:00 4.6KCOILS output, window length 14
[ ]jp_jk3L1c0.coilseq.lupas_212015-04-17 18:00 4.6KCOILS output, window length 21
[ ]jp_jk3L1c0.coilseq.lupas_282015-04-17 18:00 4.6KCOILS output, window length 28
[ ]jp_jk3L1c0.concise2015-04-17 18:00 37KPrediction: coiled-coil, solvent, alignment
[ ]jp_jk3L1c0.concise.blc2015-04-17 18:00 18KBLC format prediction and alignment data
[ ]jp_jk3L1c0.concise.fasta2015-04-17 18:00 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_jk3L1c0.concise.pdf2015-04-17 18:00 123KPDF prediction and alignment data
[ ]jp_jk3L1c0.concise.ps2015-04-17 18:00 2.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_jk3L1c0.fasta2015-04-17 17:57 124 Input query sequence in FASTA format
[ ]jp_jk3L1c0.full_MSA.fasta2015-04-17 18:00 47KFull MSA before JPred filters in FASTA
[TXT]jp_jk3L1c0.full_MSA.fasta.noGaps.html2015-04-17 18:00 37KFull MSA before JPred filters in FASTA
[TXT]jp_jk3L1c0.full_MSA.fasta.withGaps.html2015-04-17 18:00 264KFull MSA before JPred filters in FASTA
[ ]jp_jk3L1c0.hmm2015-04-17 18:00 21KHHMer2 profile of the alignment
[TXT]jp_jk3L1c0.html2015-04-17 18:00 54KHTML prediction and alignment data
[ ]jp_jk3L1c0.input2015-04-17 16:58 117 Raw input data for analysis
[ ]jp_jk3L1c0.jalview2015-04-17 18:00 3.0KJalview annotation file for alignment
[ ]jp_jk3L1c0.jnet2015-04-17 18:00 4.1KJnet secondary structure output
[TXT]jp_jk3L1c0.profile2015-04-17 17:59 18KPSIBLAST profile from alignment
[ ]jp_jk3L1c0.pssm2015-04-17 18:00 24KPSIBLAST PSSM for Jnet
[TXT]jp_jk3L1c0.results.html2016-02-15 12:20 54KJPred results page
[TXT]jp_jk3L1c0.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_jk3L1c0.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_jk3L1c0.seq2015-04-17 16:58 124 Sequence data file
[TXT]jp_jk3L1c0.simple.html2015-04-17 18:00 1.3KBrief HTML: sequence and prediction only
[TXT]jp_jk3L1c0.svg.html2015-04-17 18:00 46KJalview SVG summary of results
[ ]jp_jk3L1c0.tar.gz2015-04-17 18:00 253KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.