JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:10 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2rk3a_.name2015-04-17 15:45 0 Job name flag file
[ ]jp_4DKmiF_.align2015-04-17 16:09 195KPSIBLAST alignment in FASTA format
[TXT]jp_4DKmiF_.als2015-04-17 16:09 3.3KAlscript command file for PS/PDF output
[ ]jp_4DKmiF_.blast.gz2015-04-17 16:08 11MCompressed PSIBLAST output file
[TXT]jp_4DKmiF_.coils.csv2015-04-17 16:09 1.1KCOILS output in CSV format
[ ]jp_4DKmiF_.coilseq.lupas_142015-04-17 16:09 7.8KCOILS output, window length 14
[ ]jp_4DKmiF_.coilseq.lupas_212015-04-17 16:09 7.8KCOILS output, window length 21
[ ]jp_4DKmiF_.coilseq.lupas_282015-04-17 16:09 7.8KCOILS output, window length 28
[ ]jp_4DKmiF_.concise2015-04-17 16:09 382KPrediction: coiled-coil, solvent, alignment
[ ]jp_4DKmiF_.concise.blc2015-04-17 16:09 195KBLC format prediction and alignment data
[ ]jp_4DKmiF_.concise.fasta2015-04-17 16:09 196KPrediction: coiled-coil, solvent, alignment
[ ]jp_4DKmiF_.concise.pdf2015-04-17 16:10 1.4MPDF prediction and alignment data
[ ]jp_4DKmiF_.concise.ps2015-04-17 16:09 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_4DKmiF_.fasta2015-04-17 15:58 201 Input query sequence in FASTA format
[ ]jp_4DKmiF_.full_MSA.fasta2015-04-17 16:09 21MFull MSA before JPred filters in FASTA
[TXT]jp_4DKmiF_.full_MSA.fasta.noGaps.html2015-04-17 16:10 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_4DKmiF_.full_MSA.fasta.withGaps.html2015-04-17 16:10 59MFull MSA before JPred filters in FASTA
[ ]jp_4DKmiF_.hmm2015-04-17 16:09 35KHHMer2 profile of the alignment
[TXT]jp_4DKmiF_.html2015-04-17 16:09 397KHTML prediction and alignment data
[ ]jp_4DKmiF_.input2015-04-17 15:45 193 Raw input data for analysis
[ ]jp_4DKmiF_.jalview2015-04-17 16:09 4.6KJalview annotation file for alignment
[ ]jp_4DKmiF_.jnet2015-04-17 16:09 6.8KJnet secondary structure output
[TXT]jp_4DKmiF_.profile2015-04-17 16:06 30KPSIBLAST profile from alignment
[ ]jp_4DKmiF_.pssm2015-04-17 16:09 40KPSIBLAST PSSM for Jnet
[TXT]jp_4DKmiF_.results.html2016-02-15 12:20 84KJPred results page
[TXT]jp_4DKmiF_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_4DKmiF_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_4DKmiF_.seq2015-04-17 15:45 201 Sequence data file
[TXT]jp_4DKmiF_.simple.html2015-04-17 16:09 1.6KBrief HTML: sequence and prediction only
[TXT]jp_4DKmiF_.svg.html2015-04-17 16:10 76KJalview SVG summary of results
[ ]jp_4DKmiF_.tar.gz2015-04-17 16:10 19MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.