JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:37 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2tpsa_.name2015-04-17 18:47 0 Job name flag file
[ ]jp_wKOsRvg.align2015-04-17 21:36 228KPSIBLAST alignment in FASTA format
[TXT]jp_wKOsRvg.als2015-04-17 21:36 3.7KAlscript command file for PS/PDF output
[ ]jp_wKOsRvg.blast.gz2015-04-17 21:34 7.0MCompressed PSIBLAST output file
[TXT]jp_wKOsRvg.coils.csv2015-04-17 21:36 1.4KCOILS output in CSV format
[ ]jp_wKOsRvg.coilseq.lupas_142015-04-17 21:36 9.5KCOILS output, window length 14
[ ]jp_wKOsRvg.coilseq.lupas_212015-04-17 21:36 9.5KCOILS output, window length 21
[ ]jp_wKOsRvg.coilseq.lupas_282015-04-17 21:36 9.5KCOILS output, window length 28
[ ]jp_wKOsRvg.concise2015-04-17 21:36 450KPrediction: coiled-coil, solvent, alignment
[ ]jp_wKOsRvg.concise.blc2015-04-17 21:36 228KBLC format prediction and alignment data
[ ]jp_wKOsRvg.concise.fasta2015-04-17 21:36 231KPrediction: coiled-coil, solvent, alignment
[ ]jp_wKOsRvg.concise.pdf2015-04-17 21:37 1.6MPDF prediction and alignment data
[ ]jp_wKOsRvg.concise.ps2015-04-17 21:36 28MPrediction: coiled-coil, solvent, alignment
[ ]jp_wKOsRvg.fasta2015-04-17 20:50 242 Input query sequence in FASTA format
[ ]jp_wKOsRvg.full_MSA.fasta2015-04-17 21:35 13MFull MSA before JPred filters in FASTA
[TXT]jp_wKOsRvg.full_MSA.fasta.noGaps.html2015-04-17 21:37 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_wKOsRvg.full_MSA.fasta.withGaps.html2015-04-17 21:37 42MFull MSA before JPred filters in FASTA
[ ]jp_wKOsRvg.hmm2015-04-17 21:36 42KHHMer2 profile of the alignment
[TXT]jp_wKOsRvg.html2015-04-17 21:36 429KHTML prediction and alignment data
[ ]jp_wKOsRvg.input2015-04-17 18:47 233 Raw input data for analysis
[ ]jp_wKOsRvg.jalview2015-04-17 21:36 5.3KJalview annotation file for alignment
[ ]jp_wKOsRvg.jnet2015-04-17 21:36 8.3KJnet secondary structure output
[TXT]jp_wKOsRvg.profile2015-04-17 21:22 36KPSIBLAST profile from alignment
[ ]jp_wKOsRvg.pssm2015-04-17 21:36 49KPSIBLAST PSSM for Jnet
[TXT]jp_wKOsRvg.results.html2016-02-15 12:20 101KJPred results page
[TXT]jp_wKOsRvg.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_wKOsRvg.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_wKOsRvg.seq2015-04-17 18:47 242 Sequence data file
[TXT]jp_wKOsRvg.simple.html2015-04-17 21:36 1.7KBrief HTML: sequence and prediction only
[TXT]jp_wKOsRvg.svg.html2015-04-17 21:37 92KJalview SVG summary of results
[ ]jp_wKOsRvg.tar.gz2015-04-17 21:37 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.