A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:00 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2vu9a2.name | 2015-04-17 16:59 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_62W5_YH.align | 2015-04-17 18:00 | 2.8K | PSIBLAST alignment in FASTA format |
| jp_62W5_YH.als | 2015-04-17 18:00 | 3.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_62W5_YH.blast.gz | 2015-04-17 18:00 | 8.7K | Compressed PSIBLAST output file |
| jp_62W5_YH.coils.csv | 2015-04-17 18:00 | 1.3K | COILS output in CSV format |
| jp_62W5_YH.coilseq.lupas_14 | 2015-04-17 18:00 | 9.2K | COILS output, window length 14 |
| jp_62W5_YH.coilseq.lupas_21 | 2015-04-17 18:00 | 9.2K | COILS output, window length 21 |
| jp_62W5_YH.coilseq.lupas_28 | 2015-04-17 18:00 | 9.2K | COILS output, window length 28 |
| jp_62W5_YH.concise | 2015-04-17 18:00 | 15K | Prediction: coiled-coil, solvent, alignment |
| jp_62W5_YH.concise.blc | 2015-04-17 18:00 | 6.0K | BLC format prediction and alignment data |
| jp_62W5_YH.concise.fasta | 2015-04-17 18:00 | 5.1K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_62W5_YH.concise.pdf | 2015-04-17 18:00 | 37K | PDF prediction and alignment data |
| jp_62W5_YH.concise.ps | 2015-04-17 18:00 | 685K | Prediction: coiled-coil, solvent, alignment |
| jp_62W5_YH.fasta | 2015-04-17 17:58 | 234 | Input query sequence in FASTA format |
| jp_62W5_YH.full_MSA.fasta | 2015-04-17 18:00 | 9.5K | Full MSA before JPred filters in FASTA |
| jp_62W5_YH.full_MSA.fasta.noGaps.html | 2015-04-17 18:00 | 9.6K | Full MSA before JPred filters in FASTA |
| jp_62W5_YH.full_MSA.fasta.withGaps.html | 2015-04-17 18:00 | 31K | Full MSA before JPred filters in FASTA |
| jp_62W5_YH.hmm | 2015-04-17 18:00 | 41K | HHMer2 profile of the alignment |
| jp_62W5_YH.html | 2015-04-17 18:00 | 22K | HTML prediction and alignment data |
| jp_62W5_YH.input | 2015-04-17 16:59 | 225 | Raw input data for analysis |
| jp_62W5_YH.jalview | 2015-04-17 18:00 | 5.1K | Jalview annotation file for alignment |
| jp_62W5_YH.jnet | 2015-04-17 18:00 | 8.0K | Jnet secondary structure output |
| jp_62W5_YH.profile | 2015-04-17 17:59 | 35K | PSIBLAST profile from alignment |
| jp_62W5_YH.pssm | 2015-04-17 18:00 | 47K | PSIBLAST PSSM for Jnet |
| jp_62W5_YH.results.html | 2016-02-15 12:20 | 96K | JPred results page |
| jp_62W5_YH.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_62W5_YH.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_62W5_YH.seq | 2015-04-17 16:59 | 234 | Sequence data file |
| jp_62W5_YH.simple.html | 2015-04-17 18:00 | 1.7K | Brief HTML: sequence and prediction only |
![[TXT]](jp_62W5_YH.svg.html) | jp_62W5_YH.svg.html | 2015-04-17 18:00 | 88K | Jalview SVG summary of results |
| jp_62W5_YH.tar.gz | 2015-04-17 18:00 | 104K | Archive containing complete results |
