JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2wbma2.name2015-04-17 18:11 0 Job name flag file
[ ]jp_qqeodP1.align2015-04-17 19:55 26KPSIBLAST alignment in FASTA format
[TXT]jp_qqeodP1.als2015-04-17 19:55 1.7KAlscript command file for PS/PDF output
[ ]jp_qqeodP1.blast.gz2015-04-17 19:55 96KCompressed PSIBLAST output file
[TXT]jp_qqeodP1.coils.csv2015-04-17 19:55 480 COILS output in CSV format
[ ]jp_qqeodP1.coilseq.lupas_142015-04-17 19:55 3.1KCOILS output, window length 14
[ ]jp_qqeodP1.coilseq.lupas_212015-04-17 19:55 3.1KCOILS output, window length 21
[ ]jp_qqeodP1.coilseq.lupas_282015-04-17 19:55 3.1KCOILS output, window length 28
[ ]jp_qqeodP1.concise2015-04-17 19:55 52KPrediction: coiled-coil, solvent, alignment
[ ]jp_qqeodP1.concise.blc2015-04-17 19:55 27KBLC format prediction and alignment data
[ ]jp_qqeodP1.concise.fasta2015-04-17 19:55 27KPrediction: coiled-coil, solvent, alignment
[ ]jp_qqeodP1.concise.pdf2015-04-17 19:55 172KPDF prediction and alignment data
[ ]jp_qqeodP1.concise.ps2015-04-17 19:55 3.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_qqeodP1.fasta2015-04-17 19:52 89 Input query sequence in FASTA format
[ ]jp_qqeodP1.full_MSA.fasta2015-04-17 19:55 195KFull MSA before JPred filters in FASTA
[TXT]jp_qqeodP1.full_MSA.fasta.noGaps.html2015-04-17 19:55 117KFull MSA before JPred filters in FASTA
[TXT]jp_qqeodP1.full_MSA.fasta.withGaps.html2015-04-17 19:55 494KFull MSA before JPred filters in FASTA
[ ]jp_qqeodP1.hmm2015-04-17 19:55 14KHHMer2 profile of the alignment
[TXT]jp_qqeodP1.html2015-04-17 19:55 90KHTML prediction and alignment data
[ ]jp_qqeodP1.input2015-04-17 18:11 82 Raw input data for analysis
[ ]jp_qqeodP1.jalview2015-04-17 19:55 2.3KJalview annotation file for alignment
[ ]jp_qqeodP1.jnet2015-04-17 19:55 2.8KJnet secondary structure output
[TXT]jp_qqeodP1.profile2015-04-17 19:54 12KPSIBLAST profile from alignment
[ ]jp_qqeodP1.pssm2015-04-17 19:55 16KPSIBLAST PSSM for Jnet
[TXT]jp_qqeodP1.results.html2016-02-15 12:20 40KJPred results page
[TXT]jp_qqeodP1.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qqeodP1.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qqeodP1.seq2015-04-17 18:11 89 Sequence data file
[TXT]jp_qqeodP1.simple.html2015-04-17 19:55 1.1KBrief HTML: sequence and prediction only
[TXT]jp_qqeodP1.svg.html2015-04-17 19:55 32KJalview SVG summary of results
[ ]jp_qqeodP1.tar.gz2015-04-17 19:55 380KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.