A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:03 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2wnpf_.name | 2015-04-17 18:11 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_P0zH2GT.align | 2015-04-17 20:02 | 155K | PSIBLAST alignment in FASTA format |
| jp_P0zH2GT.als | 2015-04-17 20:02 | 3.3K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_P0zH2GT.blast.gz | 2015-04-17 20:01 | 6.9M | Compressed PSIBLAST output file |
| jp_P0zH2GT.coils.csv | 2015-04-17 20:02 | 1.3K | COILS output in CSV format |
| jp_P0zH2GT.coilseq.lupas_14 | 2015-04-17 20:02 | 9.1K | COILS output, window length 14 |
| jp_P0zH2GT.coilseq.lupas_21 | 2015-04-17 20:02 | 9.1K | COILS output, window length 21 |
| jp_P0zH2GT.coilseq.lupas_28 | 2015-04-17 20:02 | 9.1K | COILS output, window length 28 |
| jp_P0zH2GT.concise | 2015-04-17 20:02 | 308K | Prediction: coiled-coil, solvent, alignment |
| jp_P0zH2GT.concise.blc | 2015-04-17 20:02 | 156K | BLC format prediction and alignment data |
| jp_P0zH2GT.concise.fasta | 2015-04-17 20:02 | 157K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_P0zH2GT.concise.pdf | 2015-04-17 20:02 | 954K | PDF prediction and alignment data |
| jp_P0zH2GT.concise.ps | 2015-04-17 20:02 | 18M | Prediction: coiled-coil, solvent, alignment |
| jp_P0zH2GT.fasta | 2015-04-17 19:53 | 233 | Input query sequence in FASTA format |
| jp_P0zH2GT.full_MSA.fasta | 2015-04-17 20:02 | 11M | Full MSA before JPred filters in FASTA |
| jp_P0zH2GT.full_MSA.fasta.noGaps.html | 2015-04-17 20:03 | 1.5M | Full MSA before JPred filters in FASTA |
| jp_P0zH2GT.full_MSA.fasta.withGaps.html | 2015-04-17 20:03 | 32M | Full MSA before JPred filters in FASTA |
| jp_P0zH2GT.hmm | 2015-04-17 20:02 | 41K | HHMer2 profile of the alignment |
| jp_P0zH2GT.html | 2015-04-17 20:02 | 297K | HTML prediction and alignment data |
| jp_P0zH2GT.input | 2015-04-17 18:11 | 224 | Raw input data for analysis |
| jp_P0zH2GT.jalview | 2015-04-17 20:02 | 5.1K | Jalview annotation file for alignment |
| jp_P0zH2GT.jnet | 2015-04-17 20:02 | 8.0K | Jnet secondary structure output |
| jp_P0zH2GT.profile | 2015-04-17 19:59 | 35K | PSIBLAST profile from alignment |
| jp_P0zH2GT.pssm | 2015-04-17 20:02 | 47K | PSIBLAST PSSM for Jnet |
| jp_P0zH2GT.results.html | 2016-02-15 12:20 | 95K | JPred results page |
| jp_P0zH2GT.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_P0zH2GT.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_P0zH2GT.seq | 2015-04-17 18:11 | 233 | Sequence data file |
| jp_P0zH2GT.simple.html | 2015-04-17 20:02 | 1.6K | Brief HTML: sequence and prediction only |
![[TXT]](jp_P0zH2GT.svg.html) | jp_P0zH2GT.svg.html | 2015-04-17 20:03 | 87K | Jalview SVG summary of results |
| jp_P0zH2GT.tar.gz | 2015-04-17 20:03 | 11M | Archive containing complete results |
