JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:00 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2wyta_.name2015-04-17 17:36 0 Job name flag file
[ ]jp_dYtyD9E.align2015-04-17 18:59 172KPSIBLAST alignment in FASTA format
[TXT]jp_dYtyD9E.als2015-04-17 18:59 2.7KAlscript command file for PS/PDF output
[ ]jp_dYtyD9E.blast.gz2015-04-17 18:58 2.3MCompressed PSIBLAST output file
[TXT]jp_dYtyD9E.coils.csv2015-04-17 18:59 948 COILS output in CSV format
[ ]jp_dYtyD9E.coilseq.lupas_142015-04-17 18:59 6.4KCOILS output, window length 14
[ ]jp_dYtyD9E.coilseq.lupas_212015-04-17 18:59 6.4KCOILS output, window length 21
[ ]jp_dYtyD9E.coilseq.lupas_282015-04-17 18:59 6.4KCOILS output, window length 28
[ ]jp_dYtyD9E.concise2015-04-17 18:59 335KPrediction: coiled-coil, solvent, alignment
[ ]jp_dYtyD9E.concise.blc2015-04-17 18:59 171KBLC format prediction and alignment data
[ ]jp_dYtyD9E.concise.fasta2015-04-17 18:59 173KPrediction: coiled-coil, solvent, alignment
[ ]jp_dYtyD9E.concise.pdf2015-04-17 19:00 1.1MPDF prediction and alignment data
[ ]jp_dYtyD9E.concise.ps2015-04-17 18:59 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_dYtyD9E.fasta2015-04-17 18:54 168 Input query sequence in FASTA format
[ ]jp_dYtyD9E.full_MSA.fasta2015-04-17 18:58 3.9MFull MSA before JPred filters in FASTA
[TXT]jp_dYtyD9E.full_MSA.fasta.noGaps.html2015-04-17 19:00 796KFull MSA before JPred filters in FASTA
[TXT]jp_dYtyD9E.full_MSA.fasta.withGaps.html2015-04-17 19:00 13MFull MSA before JPred filters in FASTA
[ ]jp_dYtyD9E.hmm2015-04-17 18:59 29KHHMer2 profile of the alignment
[TXT]jp_dYtyD9E.html2015-04-17 18:59 378KHTML prediction and alignment data
[ ]jp_dYtyD9E.input2015-04-17 17:36 160 Raw input data for analysis
[ ]jp_dYtyD9E.jalview2015-04-17 18:59 3.8KJalview annotation file for alignment
[ ]jp_dYtyD9E.jnet2015-04-17 18:59 5.6KJnet secondary structure output
[TXT]jp_dYtyD9E.profile2015-04-17 18:57 25KPSIBLAST profile from alignment
[ ]jp_dYtyD9E.pssm2015-04-17 18:59 33KPSIBLAST PSSM for Jnet
[TXT]jp_dYtyD9E.results.html2016-02-15 12:20 68KJPred results page
[TXT]jp_dYtyD9E.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_dYtyD9E.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_dYtyD9E.seq2015-04-17 17:36 168 Sequence data file
[TXT]jp_dYtyD9E.simple.html2015-04-17 18:59 1.4KBrief HTML: sequence and prediction only
[TXT]jp_dYtyD9E.svg.html2015-04-17 19:00 60KJalview SVG summary of results
[ ]jp_dYtyD9E.tar.gz2015-04-17 19:00 4.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.