JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:42 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2xu3a_.name2015-04-17 15:46 0 Job name flag file
[ ]jp_sFJJTpN.align2015-04-17 16:40 184KPSIBLAST alignment in FASTA format
[TXT]jp_sFJJTpN.als2015-04-17 16:40 2.9KAlscript command file for PS/PDF output
[ ]jp_sFJJTpN.blast.gz2015-04-17 16:37 17MCompressed PSIBLAST output file
[TXT]jp_sFJJTpN.coils.csv2015-04-17 16:40 1.3KCOILS output in CSV format
[ ]jp_sFJJTpN.coilseq.lupas_142015-04-17 16:40 9.2KCOILS output, window length 14
[ ]jp_sFJJTpN.coilseq.lupas_212015-04-17 16:40 9.2KCOILS output, window length 21
[ ]jp_sFJJTpN.coilseq.lupas_282015-04-17 16:40 9.2KCOILS output, window length 28
[ ]jp_sFJJTpN.concise2015-04-17 16:40 364KPrediction: coiled-coil, solvent, alignment
[ ]jp_sFJJTpN.concise.blc2015-04-17 16:40 184KBLC format prediction and alignment data
[ ]jp_sFJJTpN.concise.fasta2015-04-17 16:40 186KPrediction: coiled-coil, solvent, alignment
[ ]jp_sFJJTpN.concise.pdf2015-04-17 16:40 1.2MPDF prediction and alignment data
[ ]jp_sFJJTpN.concise.ps2015-04-17 16:40 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_sFJJTpN.fasta2015-04-17 15:59 236 Input query sequence in FASTA format
[ ]jp_sFJJTpN.full_MSA.fasta2015-04-17 16:39 35MFull MSA before JPred filters in FASTA
[TXT]jp_sFJJTpN.full_MSA.fasta.noGaps.html2015-04-17 16:42 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_sFJJTpN.full_MSA.fasta.withGaps.html2015-04-17 16:42 72MFull MSA before JPred filters in FASTA
[ ]jp_sFJJTpN.hmm2015-04-17 16:40 41KHHMer2 profile of the alignment
[TXT]jp_sFJJTpN.html2015-04-17 16:40 352KHTML prediction and alignment data
[ ]jp_sFJJTpN.input2015-04-17 15:46 227 Raw input data for analysis
[ ]jp_sFJJTpN.jalview2015-04-17 16:40 5.1KJalview annotation file for alignment
[ ]jp_sFJJTpN.jnet2015-04-17 16:40 8.1KJnet secondary structure output
[TXT]jp_sFJJTpN.profile2015-04-17 16:30 35KPSIBLAST profile from alignment
[ ]jp_sFJJTpN.pssm2015-04-17 16:40 47KPSIBLAST PSSM for Jnet
[TXT]jp_sFJJTpN.results.html2016-02-15 12:20 94KJPred results page
[TXT]jp_sFJJTpN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_sFJJTpN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_sFJJTpN.seq2015-04-17 15:46 236 Sequence data file
[TXT]jp_sFJJTpN.simple.html2015-04-17 16:40 1.6KBrief HTML: sequence and prediction only
[TXT]jp_sFJJTpN.svg.html2015-04-17 16:42 86KJalview SVG summary of results
[ ]jp_sFJJTpN.tar.gz2015-04-17 16:42 25MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.