A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:57 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2za4b_.name | 2015-04-17 18:48 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_41TWkPI.align | 2015-04-17 20:57 | 86K | PSIBLAST alignment in FASTA format |
| jp_41TWkPI.als | 2015-04-17 20:57 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_41TWkPI.blast.gz | 2015-04-17 20:56 | 272K | Compressed PSIBLAST output file |
| jp_41TWkPI.coils.csv | 2015-04-17 20:57 | 564 | COILS output in CSV format |
| jp_41TWkPI.coilseq.lupas_14 | 2015-04-17 20:57 | 3.7K | COILS output, window length 14 |
| jp_41TWkPI.coilseq.lupas_21 | 2015-04-17 20:57 | 3.7K | COILS output, window length 21 |
| jp_41TWkPI.coilseq.lupas_28 | 2015-04-17 20:57 | 3.7K | COILS output, window length 28 |
| jp_41TWkPI.concise | 2015-04-17 20:57 | 164K | Prediction: coiled-coil, solvent, alignment |
| jp_41TWkPI.concise.blc | 2015-04-17 20:57 | 85K | BLC format prediction and alignment data |
| jp_41TWkPI.concise.fasta | 2015-04-17 20:57 | 87K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_41TWkPI.concise.pdf | 2015-04-17 20:57 | 540K | PDF prediction and alignment data |
| jp_41TWkPI.concise.ps | 2015-04-17 20:57 | 9.4M | Prediction: coiled-coil, solvent, alignment |
| jp_41TWkPI.fasta | 2015-04-17 20:53 | 103 | Input query sequence in FASTA format |
| jp_41TWkPI.full_MSA.fasta | 2015-04-17 20:56 | 531K | Full MSA before JPred filters in FASTA |
| jp_41TWkPI.full_MSA.fasta.noGaps.html | 2015-04-17 20:57 | 231K | Full MSA before JPred filters in FASTA |
| jp_41TWkPI.full_MSA.fasta.withGaps.html | 2015-04-17 20:57 | 2.2M | Full MSA before JPred filters in FASTA |
| jp_41TWkPI.hmm | 2015-04-17 20:57 | 17K | HHMer2 profile of the alignment |
| jp_41TWkPI.html | 2015-04-17 20:57 | 249K | HTML prediction and alignment data |
| jp_41TWkPI.input | 2015-04-17 18:48 | 96 | Raw input data for analysis |
| jp_41TWkPI.jalview | 2015-04-17 20:57 | 2.6K | Jalview annotation file for alignment |
| jp_41TWkPI.jnet | 2015-04-17 20:57 | 3.3K | Jnet secondary structure output |
| jp_41TWkPI.profile | 2015-04-17 20:55 | 15K | PSIBLAST profile from alignment |
| jp_41TWkPI.pssm | 2015-04-17 20:57 | 19K | PSIBLAST PSSM for Jnet |
| jp_41TWkPI.results.html | 2016-02-15 12:20 | 46K | JPred results page |
| jp_41TWkPI.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_41TWkPI.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_41TWkPI.seq | 2015-04-17 18:48 | 103 | Sequence data file |
| jp_41TWkPI.simple.html | 2015-04-17 20:57 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_41TWkPI.svg.html) | jp_41TWkPI.svg.html | 2015-04-17 20:57 | 38K | Jalview SVG summary of results |
| jp_41TWkPI.tar.gz | 2015-04-17 20:57 | 1.2M | Archive containing complete results |
