A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:06 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2zw2a_.name | 2015-04-17 19:26 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_dF2hcmF.align | 2015-04-17 22:06 | 81K | PSIBLAST alignment in FASTA format |
| jp_dF2hcmF.als | 2015-04-17 22:06 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_dF2hcmF.blast.gz | 2015-04-17 22:05 | 188K | Compressed PSIBLAST output file |
| jp_dF2hcmF.coils.csv | 2015-04-17 22:06 | 540 | COILS output in CSV format |
| jp_dF2hcmF.coilseq.lupas_14 | 2015-04-17 22:06 | 3.6K | COILS output, window length 14 |
| jp_dF2hcmF.coilseq.lupas_21 | 2015-04-17 22:06 | 3.6K | COILS output, window length 21 |
| jp_dF2hcmF.coilseq.lupas_28 | 2015-04-17 22:06 | 3.6K | COILS output, window length 28 |
| jp_dF2hcmF.concise | 2015-04-17 22:06 | 155K | Prediction: coiled-coil, solvent, alignment |
| jp_dF2hcmF.concise.blc | 2015-04-17 22:06 | 81K | BLC format prediction and alignment data |
| jp_dF2hcmF.concise.fasta | 2015-04-17 22:06 | 82K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_dF2hcmF.concise.pdf | 2015-04-17 22:06 | 520K | PDF prediction and alignment data |
| jp_dF2hcmF.concise.ps | 2015-04-17 22:06 | 9.0M | Prediction: coiled-coil, solvent, alignment |
| jp_dF2hcmF.fasta | 2015-04-17 21:59 | 99 | Input query sequence in FASTA format |
| jp_dF2hcmF.full_MSA.fasta | 2015-04-17 22:05 | 307K | Full MSA before JPred filters in FASTA |
| jp_dF2hcmF.full_MSA.fasta.noGaps.html | 2015-04-17 22:06 | 294K | Full MSA before JPred filters in FASTA |
| jp_dF2hcmF.full_MSA.fasta.withGaps.html | 2015-04-17 22:06 | 1.5M | Full MSA before JPred filters in FASTA |
| jp_dF2hcmF.hmm | 2015-04-17 22:06 | 16K | HHMer2 profile of the alignment |
| jp_dF2hcmF.html | 2015-04-17 22:06 | 241K | HTML prediction and alignment data |
| jp_dF2hcmF.input | 2015-04-17 19:26 | 92 | Raw input data for analysis |
| jp_dF2hcmF.jalview | 2015-04-17 22:06 | 2.6K | Jalview annotation file for alignment |
| jp_dF2hcmF.jnet | 2015-04-17 22:06 | 3.2K | Jnet secondary structure output |
| jp_dF2hcmF.profile | 2015-04-17 22:03 | 14K | PSIBLAST profile from alignment |
| jp_dF2hcmF.pssm | 2015-04-17 22:06 | 18K | PSIBLAST PSSM for Jnet |
| jp_dF2hcmF.results.html | 2016-02-15 12:20 | 44K | JPred results page |
| jp_dF2hcmF.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_dF2hcmF.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_dF2hcmF.seq | 2015-04-17 19:26 | 99 | Sequence data file |
| jp_dF2hcmF.simple.html | 2015-04-17 22:06 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_dF2hcmF.svg.html) | jp_dF2hcmF.svg.html | 2015-04-17 22:06 | 35K | Jalview SVG summary of results |
| jp_dF2hcmF.tar.gz | 2015-04-17 22:06 | 1.0M | Archive containing complete results |
