JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3a02a_.name2015-04-17 18:40 0 Job name flag file
[ ]jp__U3tZou.align2015-04-17 20:53 12KPSIBLAST alignment in FASTA format
[TXT]jp__U3tZou.als2015-04-17 20:53 1.6KAlscript command file for PS/PDF output
[ ]jp__U3tZou.blast.gz2015-04-17 20:53 2.2MCompressed PSIBLAST output file
[TXT]jp__U3tZou.coils.csv2015-04-17 20:53 336 COILS output in CSV format
[ ]jp__U3tZou.coilseq.lupas_142015-04-17 20:53 2.1KCOILS output, window length 14
[ ]jp__U3tZou.coilseq.lupas_212015-04-17 20:53 2.1KCOILS output, window length 21
[ ]jp__U3tZou.coilseq.lupas_282015-04-17 20:53 2.1KCOILS output, window length 28
[ ]jp__U3tZou.concise2015-04-17 20:53 25KPrediction: coiled-coil, solvent, alignment
[ ]jp__U3tZou.concise.blc2015-04-17 20:53 13KBLC format prediction and alignment data
[ ]jp__U3tZou.concise.fasta2015-04-17 20:53 13KPrediction: coiled-coil, solvent, alignment
[ ]jp__U3tZou.concise.pdf2015-04-17 20:53 72KPDF prediction and alignment data
[ ]jp__U3tZou.concise.ps2015-04-17 20:53 1.3MPrediction: coiled-coil, solvent, alignment
[ ]jp__U3tZou.fasta2015-04-17 20:41 64 Input query sequence in FASTA format
[ ]jp__U3tZou.full_MSA.fasta2015-04-17 20:53 2.4MFull MSA before JPred filters in FASTA
[TXT]jp__U3tZou.full_MSA.fasta.noGaps.html2015-04-17 20:53 1.8MFull MSA before JPred filters in FASTA
[TXT]jp__U3tZou.full_MSA.fasta.withGaps.html2015-04-17 20:53 8.8MFull MSA before JPred filters in FASTA
[ ]jp__U3tZou.hmm2015-04-17 20:53 9.6KHHMer2 profile of the alignment
[TXT]jp__U3tZou.html2015-04-17 20:53 52KHTML prediction and alignment data
[ ]jp__U3tZou.input2015-04-17 18:40 58 Raw input data for analysis
[ ]jp__U3tZou.jalview2015-04-17 20:53 1.8KJalview annotation file for alignment
[ ]jp__U3tZou.jnet2015-04-17 20:53 2.0KJnet secondary structure output
[TXT]jp__U3tZou.profile2015-04-17 20:49 8.6KPSIBLAST profile from alignment
[ ]jp__U3tZou.pssm2015-04-17 20:53 11KPSIBLAST PSSM for Jnet
[TXT]jp__U3tZou.results.html2016-02-15 12:20 31KJPred results page
[TXT]jp__U3tZou.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp__U3tZou.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp__U3tZou.seq2015-04-17 18:40 64 Sequence data file
[TXT]jp__U3tZou.simple.html2015-04-17 20:53 1.0KBrief HTML: sequence and prediction only
[TXT]jp__U3tZou.svg.html2015-04-17 20:53 23KJalview SVG summary of results
[ ]jp__U3tZou.tar.gz2015-04-17 20:53 3.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.