JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:56 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3ag3k_.name2015-04-17 16:24 0 Job name flag file
[ ]jp_G0hQHkV.align2015-04-17 16:56 3.7KPSIBLAST alignment in FASTA format
[TXT]jp_G0hQHkV.als2015-04-17 16:56 1.6KAlscript command file for PS/PDF output
[ ]jp_G0hQHkV.blast.gz2015-04-17 16:56 9.2KCompressed PSIBLAST output file
[TXT]jp_G0hQHkV.coils.csv2015-04-17 16:56 324 COILS output in CSV format
[ ]jp_G0hQHkV.coilseq.lupas_142015-04-17 16:56 2.1KCOILS output, window length 14
[ ]jp_G0hQHkV.coilseq.lupas_212015-04-17 16:56 2.1KCOILS output, window length 21
[ ]jp_G0hQHkV.coilseq.lupas_282015-04-17 16:56 2.1KCOILS output, window length 28
[ ]jp_G0hQHkV.concise2015-04-17 16:56 8.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_G0hQHkV.concise.blc2015-04-17 16:56 4.4KBLC format prediction and alignment data
[ ]jp_G0hQHkV.concise.fasta2015-04-17 16:56 4.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_G0hQHkV.concise.pdf2015-04-17 16:56 25KPDF prediction and alignment data
[ ]jp_G0hQHkV.concise.ps2015-04-17 16:56 434KPrediction: coiled-coil, solvent, alignment
[ ]jp_G0hQHkV.fasta2015-04-17 16:54 62 Input query sequence in FASTA format
[ ]jp_G0hQHkV.full_MSA.fasta2015-04-17 16:56 10KFull MSA before JPred filters in FASTA
[TXT]jp_G0hQHkV.full_MSA.fasta.noGaps.html2015-04-17 16:56 27KFull MSA before JPred filters in FASTA
[TXT]jp_G0hQHkV.full_MSA.fasta.withGaps.html2015-04-17 16:56 31KFull MSA before JPred filters in FASTA
[ ]jp_G0hQHkV.hmm2015-04-17 16:56 9.2KHHMer2 profile of the alignment
[TXT]jp_G0hQHkV.html2015-04-17 16:56 19KHTML prediction and alignment data
[ ]jp_G0hQHkV.input2015-04-17 16:24 56 Raw input data for analysis
[ ]jp_G0hQHkV.jalview2015-04-17 16:56 1.8KJalview annotation file for alignment
[ ]jp_G0hQHkV.jnet2015-04-17 16:56 1.9KJnet secondary structure output
[TXT]jp_G0hQHkV.profile2015-04-17 16:55 8.3KPSIBLAST profile from alignment
[ ]jp_G0hQHkV.pssm2015-04-17 16:56 11KPSIBLAST PSSM for Jnet
[TXT]jp_G0hQHkV.results.html2016-02-15 12:20 30KJPred results page
[TXT]jp_G0hQHkV.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_G0hQHkV.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_G0hQHkV.seq2015-04-17 16:24 62 Sequence data file
[TXT]jp_G0hQHkV.simple.html2015-04-17 16:56 1.0KBrief HTML: sequence and prediction only
[TXT]jp_G0hQHkV.svg.html2015-04-17 16:56 22KJalview SVG summary of results
[ ]jp_G0hQHkV.tar.gz2015-04-17 16:56 61KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.