JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:10 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3awua_.name2015-04-17 19:27 0 Job name flag file
[ ]jp_sQOodXr.align2015-04-17 22:09 294KPSIBLAST alignment in FASTA format
[TXT]jp_sQOodXr.als2015-04-17 22:09 2.3KAlscript command file for PS/PDF output
[ ]jp_sQOodXr.blast.gz2015-04-17 22:08 7.6MCompressed PSIBLAST output file
[TXT]jp_sQOodXr.coils.csv2015-04-17 22:09 1.7KCOILS output in CSV format
[ ]jp_sQOodXr.coilseq.lupas_142015-04-17 22:09 12KCOILS output, window length 14
[ ]jp_sQOodXr.coilseq.lupas_212015-04-17 22:09 12KCOILS output, window length 21
[ ]jp_sQOodXr.coilseq.lupas_282015-04-17 22:09 12KCOILS output, window length 28
[ ]jp_sQOodXr.concise2015-04-17 22:09 584KPrediction: coiled-coil, solvent, alignment
[ ]jp_sQOodXr.concise.blc2015-04-17 22:09 295KBLC format prediction and alignment data
[ ]jp_sQOodXr.concise.fasta2015-04-17 22:09 298KPrediction: coiled-coil, solvent, alignment
[ ]jp_sQOodXr.concise.pdf2015-04-17 22:10 2.1MPDF prediction and alignment data
[ ]jp_sQOodXr.concise.ps2015-04-17 22:09 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_sQOodXr.fasta2015-04-17 22:02 294 Input query sequence in FASTA format
[ ]jp_sQOodXr.full_MSA.fasta2015-04-17 22:08 14MFull MSA before JPred filters in FASTA
[TXT]jp_sQOodXr.full_MSA.fasta.noGaps.html2015-04-17 22:10 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_sQOodXr.full_MSA.fasta.withGaps.html2015-04-17 22:10 30MFull MSA before JPred filters in FASTA
[ ]jp_sQOodXr.hmm2015-04-17 22:09 52KHHMer2 profile of the alignment
[TXT]jp_sQOodXr.html2015-04-17 22:09 508KHTML prediction and alignment data
[ ]jp_sQOodXr.input2015-04-17 19:27 285 Raw input data for analysis
[ ]jp_sQOodXr.jalview2015-04-17 22:09 6.2KJalview annotation file for alignment
[ ]jp_sQOodXr.jnet2015-04-17 22:09 10KJnet secondary structure output
[TXT]jp_sQOodXr.profile2015-04-17 22:06 44KPSIBLAST profile from alignment
[ ]jp_sQOodXr.pssm2015-04-17 22:09 60KPSIBLAST PSSM for Jnet
[TXT]jp_sQOodXr.results.html2016-02-15 12:20 112KJPred results page
[TXT]jp_sQOodXr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_sQOodXr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_sQOodXr.seq2015-04-17 19:27 294 Sequence data file
[TXT]jp_sQOodXr.simple.html2015-04-17 22:09 1.6KBrief HTML: sequence and prediction only
[TXT]jp_sQOodXr.svg.html2015-04-17 22:10 104KJalview SVG summary of results
[ ]jp_sQOodXr.tar.gz2015-04-17 22:10 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.