JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:03 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3axja_.name2015-04-17 17:38 0 Job name flag file
[ ]jp_tUpfLty.align2015-04-17 19:02 132KPSIBLAST alignment in FASTA format
[TXT]jp_tUpfLty.als2015-04-17 19:02 2.5KAlscript command file for PS/PDF output
[ ]jp_tUpfLty.blast.gz2015-04-17 19:02 892KCompressed PSIBLAST output file
[TXT]jp_tUpfLty.coils.csv2015-04-17 19:02 1.3KCOILS output in CSV format
[ ]jp_tUpfLty.coilseq.lupas_142015-04-17 19:02 9.4KCOILS output, window length 14
[ ]jp_tUpfLty.coilseq.lupas_212015-04-17 19:02 9.4KCOILS output, window length 21
[ ]jp_tUpfLty.coilseq.lupas_282015-04-17 19:02 9.4KCOILS output, window length 28
[ ]jp_tUpfLty.concise2015-04-17 19:02 265KPrediction: coiled-coil, solvent, alignment
[ ]jp_tUpfLty.concise.blc2015-04-17 19:02 133KBLC format prediction and alignment data
[ ]jp_tUpfLty.concise.fasta2015-04-17 19:02 134KPrediction: coiled-coil, solvent, alignment
[ ]jp_tUpfLty.concise.pdf2015-04-17 19:02 928KPDF prediction and alignment data
[ ]jp_tUpfLty.concise.ps2015-04-17 19:02 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_tUpfLty.fasta2015-04-17 18:59 241 Input query sequence in FASTA format
[ ]jp_tUpfLty.full_MSA.fasta2015-04-17 19:02 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_tUpfLty.full_MSA.fasta.noGaps.html2015-04-17 19:02 287KFull MSA before JPred filters in FASTA
[TXT]jp_tUpfLty.full_MSA.fasta.withGaps.html2015-04-17 19:02 4.7MFull MSA before JPred filters in FASTA
[ ]jp_tUpfLty.hmm2015-04-17 19:02 42KHHMer2 profile of the alignment
[TXT]jp_tUpfLty.html2015-04-17 19:02 263KHTML prediction and alignment data
[ ]jp_tUpfLty.input2015-04-17 17:38 232 Raw input data for analysis
[ ]jp_tUpfLty.jalview2015-04-17 19:02 5.5KJalview annotation file for alignment
[ ]jp_tUpfLty.jnet2015-04-17 19:02 8.2KJnet secondary structure output
[TXT]jp_tUpfLty.profile2015-04-17 19:01 36KPSIBLAST profile from alignment
[ ]jp_tUpfLty.pssm2015-04-17 19:02 48KPSIBLAST PSSM for Jnet
[TXT]jp_tUpfLty.results.html2016-02-15 12:20 96KJPred results page
[TXT]jp_tUpfLty.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_tUpfLty.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_tUpfLty.seq2015-04-17 17:38 241 Sequence data file
[TXT]jp_tUpfLty.simple.html2015-04-17 19:02 1.5KBrief HTML: sequence and prediction only
[TXT]jp_tUpfLty.svg.html2015-04-17 19:02 88KJalview SVG summary of results
[ ]jp_tUpfLty.tar.gz2015-04-17 19:03 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.