A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:01 | 4.9K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d3bn0a1.name | 2015-04-17 18:13 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_XTB_yiS.align | 2015-04-17 20:00 | 77K | PSIBLAST alignment in FASTA format |
| jp_XTB_yiS.als | 2015-04-17 20:00 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_XTB_yiS.blast.gz | 2015-04-17 20:00 | 956K | Compressed PSIBLAST output file |
| jp_XTB_yiS.coils.csv | 2015-04-17 20:00 | 600 | COILS output in CSV format |
| jp_XTB_yiS.coilseq.lupas_14 | 2015-04-17 20:00 | 4.0K | COILS output, window length 14 |
| jp_XTB_yiS.coilseq.lupas_21 | 2015-04-17 20:00 | 4.0K | COILS output, window length 21 |
| jp_XTB_yiS.coilseq.lupas_28 | 2015-04-17 20:00 | 4.0K | COILS output, window length 28 |
| jp_XTB_yiS.concise | 2015-04-17 20:00 | 150K | Prediction: coiled-coil, solvent, alignment |
| jp_XTB_yiS.concise.blc | 2015-04-17 20:00 | 77K | BLC format prediction and alignment data |
| jp_XTB_yiS.concise.fasta | 2015-04-17 20:00 | 78K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_XTB_yiS.concise.pdf | 2015-04-17 20:00 | 2.2K | PDF prediction and alignment data |
| jp_XTB_yiS.concise.ps | 2015-04-17 20:00 | 1.3K | Prediction: coiled-coil, solvent, alignment |
| jp_XTB_yiS.fasta | 2015-04-17 19:56 | 109 | Input query sequence in FASTA format |
| jp_XTB_yiS.full_MSA.fasta | 2015-04-17 20:00 | 2.1M | Full MSA before JPred filters in FASTA |
| jp_XTB_yiS.full_MSA.fasta.noGaps.html | 2015-04-17 20:00 | 716K | Full MSA before JPred filters in FASTA |
| jp_XTB_yiS.full_MSA.fasta.withGaps.html | 2015-04-17 20:00 | 7.3M | Full MSA before JPred filters in FASTA |
| jp_XTB_yiS.hmm | 2015-04-17 20:00 | 18K | HHMer2 profile of the alignment |
| jp_XTB_yiS.html | 2015-04-17 20:00 | 218K | HTML prediction and alignment data |
| jp_XTB_yiS.input | 2015-04-17 18:13 | 102 | Raw input data for analysis |
| jp_XTB_yiS.jalview | 2015-04-17 20:00 | 2.7K | Jalview annotation file for alignment |
| jp_XTB_yiS.jnet | 2015-04-17 20:00 | 3.5K | Jnet secondary structure output |
| jp_XTB_yiS.profile | 2015-04-17 19:59 | 16K | PSIBLAST profile from alignment |
| jp_XTB_yiS.pssm | 2015-04-17 20:00 | 20K | PSIBLAST PSSM for Jnet |
| jp_XTB_yiS.results.html | 2016-02-15 12:20 | 49K | JPred results page |
| jp_XTB_yiS.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_XTB_yiS.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_XTB_yiS.seq | 2015-04-17 18:13 | 109 | Sequence data file |
| jp_XTB_yiS.simple.html | 2015-04-17 20:00 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_XTB_yiS.svg.html) | jp_XTB_yiS.svg.html | 2015-04-17 20:01 | 41K | Jalview SVG summary of results |
| jp_XTB_yiS.tar.gz | 2015-04-17 20:01 | 1.8M | Archive containing complete results |
