JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:11 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ccda_.name2015-04-17 18:58 0 Job name flag file
[ ]jp_CETzh75.align2015-04-17 21:11 86KPSIBLAST alignment in FASTA format
[TXT]jp_CETzh75.als2015-04-17 21:11 2.1KAlscript command file for PS/PDF output
[ ]jp_CETzh75.blast.gz2015-04-17 21:11 1.0MCompressed PSIBLAST output file
[TXT]jp_CETzh75.coils.csv2015-04-17 21:11 540 COILS output in CSV format
[ ]jp_CETzh75.coilseq.lupas_142015-04-17 21:11 3.6KCOILS output, window length 14
[ ]jp_CETzh75.coilseq.lupas_212015-04-17 21:11 3.6KCOILS output, window length 21
[ ]jp_CETzh75.coilseq.lupas_282015-04-17 21:11 3.6KCOILS output, window length 28
[ ]jp_CETzh75.concise2015-04-17 21:11 165KPrediction: coiled-coil, solvent, alignment
[ ]jp_CETzh75.concise.blc2015-04-17 21:11 86KBLC format prediction and alignment data
[ ]jp_CETzh75.concise.fasta2015-04-17 21:11 87KPrediction: coiled-coil, solvent, alignment
[ ]jp_CETzh75.concise.pdf2015-04-17 21:11 554KPDF prediction and alignment data
[ ]jp_CETzh75.concise.ps2015-04-17 21:11 9.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_CETzh75.fasta2015-04-17 21:08 99 Input query sequence in FASTA format
[ ]jp_CETzh75.full_MSA.fasta2015-04-17 21:11 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_CETzh75.full_MSA.fasta.noGaps.html2015-04-17 21:11 873KFull MSA before JPred filters in FASTA
[TXT]jp_CETzh75.full_MSA.fasta.withGaps.html2015-04-17 21:11 8.1MFull MSA before JPred filters in FASTA
[ ]jp_CETzh75.hmm2015-04-17 21:11 16KHHMer2 profile of the alignment
[TXT]jp_CETzh75.html2015-04-17 21:11 258KHTML prediction and alignment data
[ ]jp_CETzh75.input2015-04-17 18:58 92 Raw input data for analysis
[ ]jp_CETzh75.jalview2015-04-17 21:11 2.5KJalview annotation file for alignment
[ ]jp_CETzh75.jnet2015-04-17 21:11 3.2KJnet secondary structure output
[TXT]jp_CETzh75.profile2015-04-17 21:10 14KPSIBLAST profile from alignment
[ ]jp_CETzh75.pssm2015-04-17 21:11 18KPSIBLAST PSSM for Jnet
[TXT]jp_CETzh75.results.html2016-02-15 12:21 45KJPred results page
[TXT]jp_CETzh75.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_CETzh75.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_CETzh75.seq2015-04-17 18:58 99 Sequence data file
[TXT]jp_CETzh75.simple.html2015-04-17 21:11 1.2KBrief HTML: sequence and prediction only
[TXT]jp_CETzh75.svg.html2015-04-17 21:11 36KJalview SVG summary of results
[ ]jp_CETzh75.tar.gz2015-04-17 21:11 2.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.