A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:02 | 4.9K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3cima_.name | 2015-04-17 18:51 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_o8omJD9.align | 2015-04-17 21:01 | 91K | PSIBLAST alignment in FASTA format |
| jp_o8omJD9.als | 2015-04-17 21:01 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_o8omJD9.blast.gz | 2015-04-17 21:00 | 337K | Compressed PSIBLAST output file |
| jp_o8omJD9.coils.csv | 2015-04-17 21:01 | 594 | COILS output in CSV format |
| jp_o8omJD9.coilseq.lupas_14 | 2015-04-17 21:01 | 3.9K | COILS output, window length 14 |
| jp_o8omJD9.coilseq.lupas_21 | 2015-04-17 21:01 | 3.9K | COILS output, window length 21 |
| jp_o8omJD9.coilseq.lupas_28 | 2015-04-17 21:01 | 3.9K | COILS output, window length 28 |
| jp_o8omJD9.concise | 2015-04-17 21:01 | 175K | Prediction: coiled-coil, solvent, alignment |
| jp_o8omJD9.concise.blc | 2015-04-17 21:01 | 91K | BLC format prediction and alignment data |
| jp_o8omJD9.concise.fasta | 2015-04-17 21:01 | 92K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_o8omJD9.concise.pdf | 2015-04-17 21:01 | 2.2K | PDF prediction and alignment data |
| jp_o8omJD9.concise.ps | 2015-04-17 21:01 | 1.3K | Prediction: coiled-coil, solvent, alignment |
| jp_o8omJD9.fasta | 2015-04-17 20:58 | 108 | Input query sequence in FASTA format |
| jp_o8omJD9.full_MSA.fasta | 2015-04-17 21:00 | 358K | Full MSA before JPred filters in FASTA |
| jp_o8omJD9.full_MSA.fasta.noGaps.html | 2015-04-17 21:01 | 379K | Full MSA before JPred filters in FASTA |
| jp_o8omJD9.full_MSA.fasta.withGaps.html | 2015-04-17 21:01 | 1.6M | Full MSA before JPred filters in FASTA |
| jp_o8omJD9.hmm | 2015-04-17 21:01 | 18K | HHMer2 profile of the alignment |
| jp_o8omJD9.html | 2015-04-17 21:01 | 259K | HTML prediction and alignment data |
| jp_o8omJD9.input | 2015-04-17 18:51 | 101 | Raw input data for analysis |
| jp_o8omJD9.jalview | 2015-04-17 21:01 | 2.7K | Jalview annotation file for alignment |
| jp_o8omJD9.jnet | 2015-04-17 21:01 | 3.5K | Jnet secondary structure output |
| jp_o8omJD9.profile | 2015-04-17 20:59 | 15K | PSIBLAST profile from alignment |
| jp_o8omJD9.pssm | 2015-04-17 21:01 | 20K | PSIBLAST PSSM for Jnet |
| jp_o8omJD9.results.html | 2016-02-15 12:21 | 49K | JPred results page |
| jp_o8omJD9.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_o8omJD9.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_o8omJD9.seq | 2015-04-17 18:51 | 108 | Sequence data file |
| jp_o8omJD9.simple.html | 2015-04-17 21:01 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_o8omJD9.svg.html) | jp_o8omJD9.svg.html | 2015-04-17 21:02 | 41K | Jalview SVG summary of results |
| jp_o8omJD9.tar.gz | 2015-04-17 21:02 | 814K | Archive containing complete results |
