JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3cjsb1.name2015-04-17 19:28 0 Job name flag file
[ ]jp_7AHUpNe.align2015-04-17 22:07 32KPSIBLAST alignment in FASTA format
[TXT]jp_7AHUpNe.als2015-04-17 22:07 1.9KAlscript command file for PS/PDF output
[ ]jp_7AHUpNe.blast.gz2015-04-17 22:07 388KCompressed PSIBLAST output file
[TXT]jp_7AHUpNe.coils.csv2015-04-17 22:07 450 COILS output in CSV format
[ ]jp_7AHUpNe.coilseq.lupas_142015-04-17 22:07 2.9KCOILS output, window length 14
[ ]jp_7AHUpNe.coilseq.lupas_212015-04-17 22:07 2.9KCOILS output, window length 21
[ ]jp_7AHUpNe.coilseq.lupas_282015-04-17 22:07 2.9KCOILS output, window length 28
[ ]jp_7AHUpNe.concise2015-04-17 22:07 63KPrediction: coiled-coil, solvent, alignment
[ ]jp_7AHUpNe.concise.blc2015-04-17 22:07 33KBLC format prediction and alignment data
[ ]jp_7AHUpNe.concise.fasta2015-04-17 22:07 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_7AHUpNe.concise.pdf2015-04-17 22:07 195KPDF prediction and alignment data
[ ]jp_7AHUpNe.concise.ps2015-04-17 22:07 3.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_7AHUpNe.fasta2015-04-17 22:02 83 Input query sequence in FASTA format
[ ]jp_7AHUpNe.full_MSA.fasta2015-04-17 22:07 510KFull MSA before JPred filters in FASTA
[TXT]jp_7AHUpNe.full_MSA.fasta.noGaps.html2015-04-17 22:07 443KFull MSA before JPred filters in FASTA
[TXT]jp_7AHUpNe.full_MSA.fasta.withGaps.html2015-04-17 22:07 2.5MFull MSA before JPred filters in FASTA
[ ]jp_7AHUpNe.hmm2015-04-17 22:07 13KHHMer2 profile of the alignment
[TXT]jp_7AHUpNe.html2015-04-17 22:07 111KHTML prediction and alignment data
[ ]jp_7AHUpNe.input2015-04-17 19:28 77 Raw input data for analysis
[ ]jp_7AHUpNe.jalview2015-04-17 22:07 2.2KJalview annotation file for alignment
[ ]jp_7AHUpNe.jnet2015-04-17 22:07 2.6KJnet secondary structure output
[TXT]jp_7AHUpNe.profile2015-04-17 22:06 12KPSIBLAST profile from alignment
[ ]jp_7AHUpNe.pssm2015-04-17 22:07 15KPSIBLAST PSSM for Jnet
[TXT]jp_7AHUpNe.results.html2016-02-15 12:21 39KJPred results page
[TXT]jp_7AHUpNe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7AHUpNe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7AHUpNe.seq2015-04-17 19:28 83 Sequence data file
[TXT]jp_7AHUpNe.simple.html2015-04-17 22:07 1.1KBrief HTML: sequence and prediction only
[TXT]jp_7AHUpNe.svg.html2015-04-17 22:07 30KJalview SVG summary of results
[ ]jp_7AHUpNe.tar.gz2015-04-17 22:07 863KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.