JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:05 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3czza_.name2015-04-17 17:01 0 Job name flag file
[ ]jp_pgqgZu7.align2015-04-17 18:05 52KPSIBLAST alignment in FASTA format
[TXT]jp_pgqgZu7.als2015-04-17 18:05 2.7KAlscript command file for PS/PDF output
[ ]jp_pgqgZu7.blast.gz2015-04-17 18:05 259KCompressed PSIBLAST output file
[TXT]jp_pgqgZu7.coils.csv2015-04-17 18:05 636 COILS output in CSV format
[ ]jp_pgqgZu7.coilseq.lupas_142015-04-17 18:05 4.2KCOILS output, window length 14
[ ]jp_pgqgZu7.coilseq.lupas_212015-04-17 18:05 4.2KCOILS output, window length 21
[ ]jp_pgqgZu7.coilseq.lupas_282015-04-17 18:05 4.2KCOILS output, window length 28
[ ]jp_pgqgZu7.concise2015-04-17 18:05 104KPrediction: coiled-coil, solvent, alignment
[ ]jp_pgqgZu7.concise.blc2015-04-17 18:05 53KBLC format prediction and alignment data
[ ]jp_pgqgZu7.concise.fasta2015-04-17 18:05 54KPrediction: coiled-coil, solvent, alignment
[ ]jp_pgqgZu7.concise.pdf2015-04-17 18:05 307KPDF prediction and alignment data
[ ]jp_pgqgZu7.concise.ps2015-04-17 18:05 5.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_pgqgZu7.fasta2015-04-17 18:02 115 Input query sequence in FASTA format
[ ]jp_pgqgZu7.full_MSA.fasta2015-04-17 18:05 586KFull MSA before JPred filters in FASTA
[TXT]jp_pgqgZu7.full_MSA.fasta.noGaps.html2015-04-17 18:05 142KFull MSA before JPred filters in FASTA
[TXT]jp_pgqgZu7.full_MSA.fasta.withGaps.html2015-04-17 18:05 1.9MFull MSA before JPred filters in FASTA
[ ]jp_pgqgZu7.hmm2015-04-17 18:05 19KHHMer2 profile of the alignment
[TXT]jp_pgqgZu7.html2015-04-17 18:05 148KHTML prediction and alignment data
[ ]jp_pgqgZu7.input2015-04-17 17:01 108 Raw input data for analysis
[ ]jp_pgqgZu7.jalview2015-04-17 18:05 2.8KJalview annotation file for alignment
[ ]jp_pgqgZu7.jnet2015-04-17 18:05 3.8KJnet secondary structure output
[TXT]jp_pgqgZu7.profile2015-04-17 18:04 16KPSIBLAST profile from alignment
[ ]jp_pgqgZu7.pssm2015-04-17 18:05 22KPSIBLAST PSSM for Jnet
[TXT]jp_pgqgZu7.results.html2016-02-15 12:21 51KJPred results page
[TXT]jp_pgqgZu7.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_pgqgZu7.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_pgqgZu7.seq2015-04-17 17:01 115 Sequence data file
[TXT]jp_pgqgZu7.simple.html2015-04-17 18:05 1.3KBrief HTML: sequence and prediction only
[TXT]jp_pgqgZu7.svg.html2015-04-17 18:05 43KJalview SVG summary of results
[ ]jp_pgqgZu7.tar.gz2015-04-17 18:05 868KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.