JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:08 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3d06a_.name2015-04-17 17:01 0 Job name flag file
[ ]jp_jB4yIwu.align2015-04-17 18:08 32KPSIBLAST alignment in FASTA format
[TXT]jp_jB4yIwu.als2015-04-17 18:08 3.1KAlscript command file for PS/PDF output
[ ]jp_jB4yIwu.blast.gz2015-04-17 18:07 271KCompressed PSIBLAST output file
[TXT]jp_jB4yIwu.coils.csv2015-04-17 18:08 1.1KCOILS output in CSV format
[ ]jp_jB4yIwu.coilseq.lupas_142015-04-17 18:08 7.5KCOILS output, window length 14
[ ]jp_jB4yIwu.coilseq.lupas_212015-04-17 18:08 7.5KCOILS output, window length 21
[ ]jp_jB4yIwu.coilseq.lupas_282015-04-17 18:08 7.5KCOILS output, window length 28
[ ]jp_jB4yIwu.concise2015-04-17 18:08 70KPrediction: coiled-coil, solvent, alignment
[ ]jp_jB4yIwu.concise.blc2015-04-17 18:08 34KBLC format prediction and alignment data
[ ]jp_jB4yIwu.concise.fasta2015-04-17 18:08 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_jB4yIwu.concise.pdf2015-04-17 18:08 227KPDF prediction and alignment data
[ ]jp_jB4yIwu.concise.ps2015-04-17 18:08 4.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_jB4yIwu.fasta2015-04-17 18:02 194 Input query sequence in FASTA format
[ ]jp_jB4yIwu.full_MSA.fasta2015-04-17 18:08 360KFull MSA before JPred filters in FASTA
[TXT]jp_jB4yIwu.full_MSA.fasta.noGaps.html2015-04-17 18:08 141KFull MSA before JPred filters in FASTA
[TXT]jp_jB4yIwu.full_MSA.fasta.withGaps.html2015-04-17 18:08 1.3MFull MSA before JPred filters in FASTA
[ ]jp_jB4yIwu.hmm2015-04-17 18:08 34KHHMer2 profile of the alignment
[TXT]jp_jB4yIwu.html2015-04-17 18:08 80KHTML prediction and alignment data
[ ]jp_jB4yIwu.input2015-04-17 17:01 186 Raw input data for analysis
[ ]jp_jB4yIwu.jalview2015-04-17 18:08 4.3KJalview annotation file for alignment
[ ]jp_jB4yIwu.jnet2015-04-17 18:08 6.6KJnet secondary structure output
[TXT]jp_jB4yIwu.profile2015-04-17 18:05 29KPSIBLAST profile from alignment
[ ]jp_jB4yIwu.pssm2015-04-17 18:08 38KPSIBLAST PSSM for Jnet
[TXT]jp_jB4yIwu.results.html2016-02-15 12:21 79KJPred results page
[TXT]jp_jB4yIwu.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_jB4yIwu.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_jB4yIwu.seq2015-04-17 17:01 194 Sequence data file
[TXT]jp_jB4yIwu.simple.html2015-04-17 18:08 1.5KBrief HTML: sequence and prediction only
[TXT]jp_jB4yIwu.svg.html2015-04-17 18:08 71KJalview SVG summary of results
[ ]jp_jB4yIwu.tar.gz2015-04-17 18:08 700KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.