JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:05 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3d36c_.name2015-04-17 17:01 0 Job name flag file
[ ]jp_5J6hh2g.align2015-04-17 18:05 3.4KPSIBLAST alignment in FASTA format
[TXT]jp_5J6hh2g.als2015-04-17 18:05 1.4KAlscript command file for PS/PDF output
[ ]jp_5J6hh2g.blast.gz2015-04-17 18:05 6.3KCompressed PSIBLAST output file
[TXT]jp_5J6hh2g.coils.csv2015-04-17 18:05 282 COILS output in CSV format
[ ]jp_5J6hh2g.coilseq.lupas_142015-04-17 18:05 1.8KCOILS output, window length 14
[ ]jp_5J6hh2g.coilseq.lupas_212015-04-17 18:05 1.8KCOILS output, window length 21
[ ]jp_5J6hh2g.coilseq.lupas_282015-04-17 18:05 1.8KCOILS output, window length 28
[ ]jp_5J6hh2g.concise2015-04-17 18:05 8.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_5J6hh2g.concise.blc2015-04-17 18:05 4.0KBLC format prediction and alignment data
[ ]jp_5J6hh2g.concise.fasta2015-04-17 18:05 3.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_5J6hh2g.concise.pdf2015-04-17 18:05 25KPDF prediction and alignment data
[ ]jp_5J6hh2g.concise.ps2015-04-17 18:05 409KPrediction: coiled-coil, solvent, alignment
[ ]jp_5J6hh2g.fasta2015-04-17 18:03 55 Input query sequence in FASTA format
[ ]jp_5J6hh2g.full_MSA.fasta2015-04-17 18:05 5.3KFull MSA before JPred filters in FASTA
[TXT]jp_5J6hh2g.full_MSA.fasta.noGaps.html2015-04-17 18:05 15KFull MSA before JPred filters in FASTA
[TXT]jp_5J6hh2g.full_MSA.fasta.withGaps.html2015-04-17 18:05 15KFull MSA before JPred filters in FASTA
[ ]jp_5J6hh2g.hmm2015-04-17 18:05 7.9KHHMer2 profile of the alignment
[TXT]jp_5J6hh2g.html2015-04-17 18:05 21KHTML prediction and alignment data
[ ]jp_5J6hh2g.input2015-04-17 17:01 49 Raw input data for analysis
[ ]jp_5J6hh2g.jalview2015-04-17 18:05 1.7KJalview annotation file for alignment
[ ]jp_5J6hh2g.jnet2015-04-17 18:05 1.6KJnet secondary structure output
[TXT]jp_5J6hh2g.profile2015-04-17 18:04 7.2KPSIBLAST profile from alignment
[ ]jp_5J6hh2g.pssm2015-04-17 18:05 9.0KPSIBLAST PSSM for Jnet
[TXT]jp_5J6hh2g.results.html2016-02-15 12:21 27KJPred results page
[TXT]jp_5J6hh2g.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5J6hh2g.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5J6hh2g.seq2015-04-17 17:01 55 Sequence data file
[TXT]jp_5J6hh2g.simple.html2015-04-17 18:05 1.0KBrief HTML: sequence and prediction only
[TXT]jp_5J6hh2g.svg.html2015-04-17 18:05 19KJalview SVG summary of results
[ ]jp_5J6hh2g.tar.gz2015-04-17 18:05 54KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.