A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:00 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3d3ra1.name | 2015-04-17 16:25 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_2tWYTT3.align | 2015-04-17 17:00 | 92K | PSIBLAST alignment in FASTA format |
| jp_2tWYTT3.als | 2015-04-17 17:00 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_2tWYTT3.blast.gz | 2015-04-17 16:59 | 293K | Compressed PSIBLAST output file |
| jp_2tWYTT3.coils.csv | 2015-04-17 17:00 | 486 | COILS output in CSV format |
| jp_2tWYTT3.coilseq.lupas_14 | 2015-04-17 17:00 | 3.2K | COILS output, window length 14 |
| jp_2tWYTT3.coilseq.lupas_21 | 2015-04-17 17:00 | 3.2K | COILS output, window length 21 |
| jp_2tWYTT3.coilseq.lupas_28 | 2015-04-17 17:00 | 3.2K | COILS output, window length 28 |
| jp_2tWYTT3.concise | 2015-04-17 17:00 | 174K | Prediction: coiled-coil, solvent, alignment |
| jp_2tWYTT3.concise.blc | 2015-04-17 17:00 | 91K | BLC format prediction and alignment data |
| jp_2tWYTT3.concise.fasta | 2015-04-17 17:00 | 93K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_2tWYTT3.concise.pdf | 2015-04-17 17:00 | 582K | PDF prediction and alignment data |
| jp_2tWYTT3.concise.ps | 2015-04-17 17:00 | 10M | Prediction: coiled-coil, solvent, alignment |
| jp_2tWYTT3.fasta | 2015-04-17 16:55 | 90 | Input query sequence in FASTA format |
| jp_2tWYTT3.full_MSA.fasta | 2015-04-17 16:59 | 354K | Full MSA before JPred filters in FASTA |
| jp_2tWYTT3.full_MSA.fasta.noGaps.html | 2015-04-17 17:00 | 283K | Full MSA before JPred filters in FASTA |
| jp_2tWYTT3.full_MSA.fasta.withGaps.html | 2015-04-17 17:00 | 1.9M | Full MSA before JPred filters in FASTA |
| jp_2tWYTT3.hmm | 2015-04-17 17:00 | 14K | HHMer2 profile of the alignment |
| jp_2tWYTT3.html | 2015-04-17 17:00 | 288K | HTML prediction and alignment data |
| jp_2tWYTT3.input | 2015-04-17 16:25 | 83 | Raw input data for analysis |
| jp_2tWYTT3.jalview | 2015-04-17 17:00 | 2.4K | Jalview annotation file for alignment |
| jp_2tWYTT3.jnet | 2015-04-17 17:00 | 2.9K | Jnet secondary structure output |
| jp_2tWYTT3.profile | 2015-04-17 16:58 | 13K | PSIBLAST profile from alignment |
| jp_2tWYTT3.pssm | 2015-04-17 17:00 | 16K | PSIBLAST PSSM for Jnet |
| jp_2tWYTT3.results.html | 2016-02-15 12:21 | 41K | JPred results page |
| jp_2tWYTT3.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_2tWYTT3.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_2tWYTT3.seq | 2015-04-17 16:25 | 90 | Sequence data file |
| jp_2tWYTT3.simple.html | 2015-04-17 17:00 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_2tWYTT3.svg.html) | jp_2tWYTT3.svg.html | 2015-04-17 17:00 | 33K | Jalview SVG summary of results |
| jp_2tWYTT3.tar.gz | 2015-04-17 17:00 | 1.2M | Archive containing complete results |
