A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:07 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3e9va1.name | 2015-04-17 17:02 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_96M1XZT.align | 2015-04-17 18:07 | 31K | PSIBLAST alignment in FASTA format |
| jp_96M1XZT.als | 2015-04-17 18:07 | 2.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_96M1XZT.blast.gz | 2015-04-17 18:07 | 177K | Compressed PSIBLAST output file |
| jp_96M1XZT.coils.csv | 2015-04-17 18:07 | 750 | COILS output in CSV format |
| jp_96M1XZT.coilseq.lupas_14 | 2015-04-17 18:07 | 5.0K | COILS output, window length 14 |
| jp_96M1XZT.coilseq.lupas_21 | 2015-04-17 18:07 | 5.0K | COILS output, window length 21 |
| jp_96M1XZT.coilseq.lupas_28 | 2015-04-17 18:07 | 5.0K | COILS output, window length 28 |
| jp_96M1XZT.concise | 2015-04-17 18:07 | 63K | Prediction: coiled-coil, solvent, alignment |
| jp_96M1XZT.concise.blc | 2015-04-17 18:07 | 32K | BLC format prediction and alignment data |
| jp_96M1XZT.concise.fasta | 2015-04-17 18:07 | 32K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_96M1XZT.concise.pdf | 2015-04-17 18:07 | 214K | PDF prediction and alignment data |
| jp_96M1XZT.concise.ps | 2015-04-17 18:07 | 3.7M | Prediction: coiled-coil, solvent, alignment |
| jp_96M1XZT.fasta | 2015-04-17 18:03 | 134 | Input query sequence in FASTA format |
| jp_96M1XZT.full_MSA.fasta | 2015-04-17 18:07 | 272K | Full MSA before JPred filters in FASTA |
| jp_96M1XZT.full_MSA.fasta.noGaps.html | 2015-04-17 18:07 | 134K | Full MSA before JPred filters in FASTA |
| jp_96M1XZT.full_MSA.fasta.withGaps.html | 2015-04-17 18:07 | 1.1M | Full MSA before JPred filters in FASTA |
| jp_96M1XZT.hmm | 2015-04-17 18:07 | 23K | HHMer2 profile of the alignment |
| jp_96M1XZT.html | 2015-04-17 18:07 | 87K | HTML prediction and alignment data |
| jp_96M1XZT.input | 2015-04-17 17:02 | 127 | Raw input data for analysis |
| jp_96M1XZT.jalview | 2015-04-17 18:07 | 3.2K | Jalview annotation file for alignment |
| jp_96M1XZT.jnet | 2015-04-17 18:07 | 4.4K | Jnet secondary structure output |
| jp_96M1XZT.profile | 2015-04-17 18:05 | 19K | PSIBLAST profile from alignment |
| jp_96M1XZT.pssm | 2015-04-17 18:07 | 26K | PSIBLAST PSSM for Jnet |
| jp_96M1XZT.results.html | 2016-02-15 12:21 | 58K | JPred results page |
| jp_96M1XZT.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_96M1XZT.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_96M1XZT.seq | 2015-04-17 17:02 | 134 | Sequence data file |
| jp_96M1XZT.simple.html | 2015-04-17 18:07 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_96M1XZT.svg.html) | jp_96M1XZT.svg.html | 2015-04-17 18:07 | 50K | Jalview SVG summary of results |
| jp_96M1XZT.tar.gz | 2015-04-17 18:07 | 568K | Archive containing complete results |
