JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:58 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3essa_.name2015-04-17 16:26 0 Job name flag file
[ ]jp_s0X1DPb.align2015-04-17 16:58 1.3KPSIBLAST alignment in FASTA format
[TXT]jp_s0X1DPb.als2015-04-17 16:58 3.1KAlscript command file for PS/PDF output
[ ]jp_s0X1DPb.blast.gz2015-04-17 16:58 3.5KCompressed PSIBLAST output file
[TXT]jp_s0X1DPb.coils.csv2015-04-17 16:58 1.2KCOILS output in CSV format
[ ]jp_s0X1DPb.coilseq.lupas_142015-04-17 16:58 8.4KCOILS output, window length 14
[ ]jp_s0X1DPb.coilseq.lupas_212015-04-17 16:58 8.4KCOILS output, window length 21
[ ]jp_s0X1DPb.coilseq.lupas_282015-04-17 16:58 8.4KCOILS output, window length 28
[ ]jp_s0X1DPb.concise2015-04-17 16:58 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_s0X1DPb.concise.blc2015-04-17 16:58 4.3KBLC format prediction and alignment data
[ ]jp_s0X1DPb.concise.fasta2015-04-17 16:58 3.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_s0X1DPb.concise.pdf2015-04-17 16:58 27KPDF prediction and alignment data
[ ]jp_s0X1DPb.concise.ps2015-04-17 16:58 476KPrediction: coiled-coil, solvent, alignment
[ ]jp_s0X1DPb.fasta2015-04-17 16:57 214 Input query sequence in FASTA format
[ ]jp_s0X1DPb.full_MSA.fasta2015-04-17 16:58 2.9KFull MSA before JPred filters in FASTA
[TXT]jp_s0X1DPb.full_MSA.fasta.noGaps.html2015-04-17 16:58 3.5KFull MSA before JPred filters in FASTA
[TXT]jp_s0X1DPb.full_MSA.fasta.withGaps.html2015-04-17 16:58 8.4KFull MSA before JPred filters in FASTA
[ ]jp_s0X1DPb.hmm2015-04-17 16:58 37KHHMer2 profile of the alignment
[TXT]jp_s0X1DPb.html2015-04-17 16:58 18KHTML prediction and alignment data
[ ]jp_s0X1DPb.input2015-04-17 16:26 206 Raw input data for analysis
[ ]jp_s0X1DPb.jalview2015-04-17 16:58 4.7KJalview annotation file for alignment
[ ]jp_s0X1DPb.jnet2015-04-17 16:58 7.3KJnet secondary structure output
[TXT]jp_s0X1DPb.profile2015-04-17 16:57 32KPSIBLAST profile from alignment
[ ]jp_s0X1DPb.pssm2015-04-17 16:58 43KPSIBLAST PSSM for Jnet
[TXT]jp_s0X1DPb.results.html2016-02-15 12:21 88KJPred results page
[TXT]jp_s0X1DPb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_s0X1DPb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_s0X1DPb.seq2015-04-17 16:26 214 Sequence data file
[TXT]jp_s0X1DPb.simple.html2015-04-17 16:58 1.6KBrief HTML: sequence and prediction only
[TXT]jp_s0X1DPb.svg.html2015-04-17 16:58 80KJalview SVG summary of results
[ ]jp_s0X1DPb.tar.gz2015-04-17 16:58 76KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.