JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:53 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3f42a_.name2015-04-17 17:02 0 Job name flag file
[ ]jp_qO5ooj6.align2015-04-17 18:52 101KPSIBLAST alignment in FASTA format
[TXT]jp_qO5ooj6.als2015-04-17 18:52 2.1KAlscript command file for PS/PDF output
[ ]jp_qO5ooj6.blast.gz2015-04-17 18:52 397KCompressed PSIBLAST output file
[TXT]jp_qO5ooj6.coils.csv2015-04-17 18:52 588 COILS output in CSV format
[ ]jp_qO5ooj6.coilseq.lupas_142015-04-17 18:52 3.9KCOILS output, window length 14
[ ]jp_qO5ooj6.coilseq.lupas_212015-04-17 18:52 3.9KCOILS output, window length 21
[ ]jp_qO5ooj6.coilseq.lupas_282015-04-17 18:52 3.9KCOILS output, window length 28
[ ]jp_qO5ooj6.concise2015-04-17 18:52 194KPrediction: coiled-coil, solvent, alignment
[ ]jp_qO5ooj6.concise.blc2015-04-17 18:52 101KBLC format prediction and alignment data
[ ]jp_qO5ooj6.concise.fasta2015-04-17 18:52 102KPrediction: coiled-coil, solvent, alignment
[ ]jp_qO5ooj6.concise.pdf2015-04-17 18:53 557KPDF prediction and alignment data
[ ]jp_qO5ooj6.concise.ps2015-04-17 18:52 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_qO5ooj6.fasta2015-04-17 18:04 107 Input query sequence in FASTA format
[ ]jp_qO5ooj6.full_MSA.fasta2015-04-17 18:52 735KFull MSA before JPred filters in FASTA
[TXT]jp_qO5ooj6.full_MSA.fasta.noGaps.html2015-04-17 18:53 552KFull MSA before JPred filters in FASTA
[TXT]jp_qO5ooj6.full_MSA.fasta.withGaps.html2015-04-17 18:53 3.3MFull MSA before JPred filters in FASTA
[ ]jp_qO5ooj6.hmm2015-04-17 18:52 17KHHMer2 profile of the alignment
[TXT]jp_qO5ooj6.html2015-04-17 18:52 288KHTML prediction and alignment data
[ ]jp_qO5ooj6.input2015-04-17 17:02 100 Raw input data for analysis
[ ]jp_qO5ooj6.jalview2015-04-17 18:52 2.8KJalview annotation file for alignment
[ ]jp_qO5ooj6.jnet2015-04-17 18:52 3.5KJnet secondary structure output
[TXT]jp_qO5ooj6.profile2015-04-17 18:45 15KPSIBLAST profile from alignment
[ ]jp_qO5ooj6.pssm2015-04-17 18:52 20KPSIBLAST PSSM for Jnet
[TXT]jp_qO5ooj6.results.html2016-02-15 12:21 47KJPred results page
[TXT]jp_qO5ooj6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qO5ooj6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qO5ooj6.seq2015-04-17 17:02 107 Sequence data file
[TXT]jp_qO5ooj6.simple.html2015-04-17 18:52 1.2KBrief HTML: sequence and prediction only
[TXT]jp_qO5ooj6.svg.html2015-04-17 18:53 39KJalview SVG summary of results
[ ]jp_qO5ooj6.tar.gz2015-04-17 18:53 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.