JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3faua_.name2015-04-17 17:40 0 Job name flag file
[ ]jp_JI_AsIT.align2015-04-17 20:55 35KPSIBLAST alignment in FASTA format
[TXT]jp_JI_AsIT.als2015-04-17 20:55 2.0KAlscript command file for PS/PDF output
[ ]jp_JI_AsIT.blast.gz2015-04-17 20:54 181KCompressed PSIBLAST output file
[TXT]jp_JI_AsIT.coils.csv2015-04-17 20:55 456 COILS output in CSV format
[ ]jp_JI_AsIT.coilseq.lupas_142015-04-17 20:55 3.0KCOILS output, window length 14
[ ]jp_JI_AsIT.coilseq.lupas_212015-04-17 20:55 3.0KCOILS output, window length 21
[ ]jp_JI_AsIT.coilseq.lupas_282015-04-17 20:55 3.0KCOILS output, window length 28
[ ]jp_JI_AsIT.concise2015-04-17 20:55 69KPrediction: coiled-coil, solvent, alignment
[ ]jp_JI_AsIT.concise.blc2015-04-17 20:55 36KBLC format prediction and alignment data
[ ]jp_JI_AsIT.concise.fasta2015-04-17 20:55 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_JI_AsIT.concise.pdf2015-04-17 20:55 242KPDF prediction and alignment data
[ ]jp_JI_AsIT.concise.ps2015-04-17 20:55 4.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_JI_AsIT.fasta2015-04-17 19:00 84 Input query sequence in FASTA format
[ ]jp_JI_AsIT.full_MSA.fasta2015-04-17 20:54 510KFull MSA before JPred filters in FASTA
[TXT]jp_JI_AsIT.full_MSA.fasta.noGaps.html2015-04-17 20:55 158KFull MSA before JPred filters in FASTA
[TXT]jp_JI_AsIT.full_MSA.fasta.withGaps.html2015-04-17 20:55 1.4MFull MSA before JPred filters in FASTA
[ ]jp_JI_AsIT.hmm2015-04-17 20:55 13KHHMer2 profile of the alignment
[TXT]jp_JI_AsIT.html2015-04-17 20:55 121KHTML prediction and alignment data
[ ]jp_JI_AsIT.input2015-04-17 17:40 78 Raw input data for analysis
[ ]jp_JI_AsIT.jalview2015-04-17 20:55 2.3KJalview annotation file for alignment
[ ]jp_JI_AsIT.jnet2015-04-17 20:55 2.7KJnet secondary structure output
[TXT]jp_JI_AsIT.profile2015-04-17 20:46 12KPSIBLAST profile from alignment
[ ]jp_JI_AsIT.pssm2015-04-17 20:55 15KPSIBLAST PSSM for Jnet
[TXT]jp_JI_AsIT.results.html2016-02-15 12:21 39KJPred results page
[TXT]jp_JI_AsIT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JI_AsIT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JI_AsIT.seq2015-04-17 17:40 84 Sequence data file
[TXT]jp_JI_AsIT.simple.html2015-04-17 20:55 1.1KBrief HTML: sequence and prediction only
[TXT]jp_JI_AsIT.svg.html2015-04-17 20:55 31KJalview SVG summary of results
[ ]jp_JI_AsIT.tar.gz2015-04-17 20:55 634KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.