JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:45 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3fsoa_.name2015-04-17 19:28 0 Job name flag file
[ ]jp_bUt6mil.align2015-04-17 22:44 110KPSIBLAST alignment in FASTA format
[TXT]jp_bUt6mil.als2015-04-17 22:44 2.5KAlscript command file for PS/PDF output
[ ]jp_bUt6mil.blast.gz2015-04-17 22:42 5.0MCompressed PSIBLAST output file
[TXT]jp_bUt6mil.coils.csv2015-04-17 22:44 684 COILS output in CSV format
[ ]jp_bUt6mil.coilseq.lupas_142015-04-17 22:44 4.6KCOILS output, window length 14
[ ]jp_bUt6mil.coilseq.lupas_212015-04-17 22:44 4.6KCOILS output, window length 21
[ ]jp_bUt6mil.coilseq.lupas_282015-04-17 22:44 4.6KCOILS output, window length 28
[ ]jp_bUt6mil.concise2015-04-17 22:44 212KPrediction: coiled-coil, solvent, alignment
[ ]jp_bUt6mil.concise.blc2015-04-17 22:44 110KBLC format prediction and alignment data
[ ]jp_bUt6mil.concise.fasta2015-04-17 22:44 111KPrediction: coiled-coil, solvent, alignment
[ ]jp_bUt6mil.concise.pdf2015-04-17 22:44 673KPDF prediction and alignment data
[ ]jp_bUt6mil.concise.ps2015-04-17 22:44 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_bUt6mil.fasta2015-04-17 22:03 123 Input query sequence in FASTA format
[ ]jp_bUt6mil.full_MSA.fasta2015-04-17 22:43 14MFull MSA before JPred filters in FASTA
[TXT]jp_bUt6mil.full_MSA.fasta.noGaps.html2015-04-17 22:44 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_bUt6mil.full_MSA.fasta.withGaps.html2015-04-17 22:44 36MFull MSA before JPred filters in FASTA
[ ]jp_bUt6mil.hmm2015-04-17 22:44 20KHHMer2 profile of the alignment
[TXT]jp_bUt6mil.html2015-04-17 22:44 286KHTML prediction and alignment data
[ ]jp_bUt6mil.input2015-04-17 19:28 116 Raw input data for analysis
[ ]jp_bUt6mil.jalview2015-04-17 22:44 3.0KJalview annotation file for alignment
[ ]jp_bUt6mil.jnet2015-04-17 22:44 4.0KJnet secondary structure output
[TXT]jp_bUt6mil.profile2015-04-17 22:37 18KPSIBLAST profile from alignment
[ ]jp_bUt6mil.pssm2015-04-17 22:44 23KPSIBLAST PSSM for Jnet
[TXT]jp_bUt6mil.results.html2016-02-15 12:21 53KJPred results page
[TXT]jp_bUt6mil.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_bUt6mil.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_bUt6mil.seq2015-04-17 19:28 123 Sequence data file
[TXT]jp_bUt6mil.simple.html2015-04-17 22:44 1.3KBrief HTML: sequence and prediction only
[TXT]jp_bUt6mil.svg.html2015-04-17 22:45 45KJalview SVG summary of results
[ ]jp_bUt6mil.tar.gz2015-04-17 22:45 9.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.