JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:05 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3fx7a_.name2015-04-17 18:52 0 Job name flag file
[ ]jp_XBzTwPR.align2015-04-17 22:04 2.7KPSIBLAST alignment in FASTA format
[TXT]jp_XBzTwPR.als2015-04-17 22:04 1.5KAlscript command file for PS/PDF output
[ ]jp_XBzTwPR.blast.gz2015-04-17 22:04 5.2KCompressed PSIBLAST output file
[TXT]jp_XBzTwPR.coils.csv2015-04-17 22:04 534 COILS output in CSV format
[ ]jp_XBzTwPR.coilseq.lupas_142015-04-17 22:04 3.5KCOILS output, window length 14
[ ]jp_XBzTwPR.coilseq.lupas_212015-04-17 22:04 3.5KCOILS output, window length 21
[ ]jp_XBzTwPR.coilseq.lupas_282015-04-17 22:04 3.5KCOILS output, window length 28
[ ]jp_XBzTwPR.concise2015-04-17 22:04 8.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_XBzTwPR.concise.blc2015-04-17 22:04 3.9KBLC format prediction and alignment data
[ ]jp_XBzTwPR.concise.fasta2015-04-17 22:04 3.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_XBzTwPR.concise.pdf2015-04-17 22:04 26KPDF prediction and alignment data
[ ]jp_XBzTwPR.concise.ps2015-04-17 22:04 448KPrediction: coiled-coil, solvent, alignment
[ ]jp_XBzTwPR.fasta2015-04-17 20:58 98 Input query sequence in FASTA format
[ ]jp_XBzTwPR.full_MSA.fasta2015-04-17 22:04 4.3KFull MSA before JPred filters in FASTA
[TXT]jp_XBzTwPR.full_MSA.fasta.noGaps.html2015-04-17 22:05 8.8KFull MSA before JPred filters in FASTA
[TXT]jp_XBzTwPR.full_MSA.fasta.withGaps.html2015-04-17 22:05 11KFull MSA before JPred filters in FASTA
[ ]jp_XBzTwPR.hmm2015-04-17 22:04 16KHHMer2 profile of the alignment
[TXT]jp_XBzTwPR.html2015-04-17 22:04 19KHTML prediction and alignment data
[ ]jp_XBzTwPR.input2015-04-17 18:52 91 Raw input data for analysis
[ ]jp_XBzTwPR.jalview2015-04-17 22:04 2.6KJalview annotation file for alignment
[ ]jp_XBzTwPR.jnet2015-04-17 22:04 3.1KJnet secondary structure output
[TXT]jp_XBzTwPR.profile2015-04-17 21:54 14KPSIBLAST profile from alignment
[ ]jp_XBzTwPR.pssm2015-04-17 22:04 18KPSIBLAST PSSM for Jnet
[TXT]jp_XBzTwPR.results.html2016-02-15 12:21 42KJPred results page
[TXT]jp_XBzTwPR.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_XBzTwPR.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_XBzTwPR.seq2015-04-17 18:52 98 Sequence data file
[TXT]jp_XBzTwPR.simple.html2015-04-17 22:04 1.1KBrief HTML: sequence and prediction only
[TXT]jp_XBzTwPR.svg.html2015-04-17 22:05 34KJalview SVG summary of results
[ ]jp_XBzTwPR.tar.gz2015-04-17 22:05 60KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.