JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3fxka2.name2015-04-17 18:14 0 Job name flag file
[ ]jp_A4zVm4q.align2015-04-17 20:07 8.9KPSIBLAST alignment in FASTA format
[TXT]jp_A4zVm4q.als2015-04-17 20:07 1.6KAlscript command file for PS/PDF output
[ ]jp_A4zVm4q.blast.gz2015-04-17 20:07 40KCompressed PSIBLAST output file
[TXT]jp_A4zVm4q.coils.csv2015-04-17 20:07 438 COILS output in CSV format
[ ]jp_A4zVm4q.coilseq.lupas_142015-04-17 20:07 2.9KCOILS output, window length 14
[ ]jp_A4zVm4q.coilseq.lupas_212015-04-17 20:07 2.9KCOILS output, window length 21
[ ]jp_A4zVm4q.coilseq.lupas_282015-04-17 20:07 2.9KCOILS output, window length 28
[ ]jp_A4zVm4q.concise2015-04-17 20:07 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_A4zVm4q.concise.blc2015-04-17 20:07 9.9KBLC format prediction and alignment data
[ ]jp_A4zVm4q.concise.fasta2015-04-17 20:07 9.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_A4zVm4q.concise.pdf2015-04-17 20:07 63KPDF prediction and alignment data
[ ]jp_A4zVm4q.concise.ps2015-04-17 20:07 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_A4zVm4q.fasta2015-04-17 20:01 81 Input query sequence in FASTA format
[ ]jp_A4zVm4q.full_MSA.fasta2015-04-17 20:07 46KFull MSA before JPred filters in FASTA
[TXT]jp_A4zVm4q.full_MSA.fasta.noGaps.html2015-04-17 20:07 40KFull MSA before JPred filters in FASTA
[TXT]jp_A4zVm4q.full_MSA.fasta.withGaps.html2015-04-17 20:07 180KFull MSA before JPred filters in FASTA
[ ]jp_A4zVm4q.hmm2015-04-17 20:07 13KHHMer2 profile of the alignment
[TXT]jp_A4zVm4q.html2015-04-17 20:07 38KHTML prediction and alignment data
[ ]jp_A4zVm4q.input2015-04-17 18:14 75 Raw input data for analysis
[ ]jp_A4zVm4q.jalview2015-04-17 20:07 2.2KJalview annotation file for alignment
[ ]jp_A4zVm4q.jnet2015-04-17 20:07 2.6KJnet secondary structure output
[TXT]jp_A4zVm4q.profile2015-04-17 20:04 11KPSIBLAST profile from alignment
[ ]jp_A4zVm4q.pssm2015-04-17 20:07 15KPSIBLAST PSSM for Jnet
[TXT]jp_A4zVm4q.results.html2016-02-15 12:21 37KJPred results page
[TXT]jp_A4zVm4q.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_A4zVm4q.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_A4zVm4q.seq2015-04-17 18:14 81 Sequence data file
[TXT]jp_A4zVm4q.simple.html2015-04-17 20:07 1.0KBrief HTML: sequence and prediction only
[TXT]jp_A4zVm4q.svg.html2015-04-17 20:07 29KJalview SVG summary of results
[ ]jp_A4zVm4q.tar.gz2015-04-17 20:07 159KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.