JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:27 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ge3c_.name2015-04-17 19:06 0 Job name flag file
[ ]jp_IgKdqeA.align2015-04-17 21:27 3.5KPSIBLAST alignment in FASTA format
[TXT]jp_IgKdqeA.als2015-04-17 21:27 2.1KAlscript command file for PS/PDF output
[ ]jp_IgKdqeA.blast.gz2015-04-17 21:27 8.7KCompressed PSIBLAST output file
[TXT]jp_IgKdqeA.coils.csv2015-04-17 21:27 528 COILS output in CSV format
[ ]jp_IgKdqeA.coilseq.lupas_142015-04-17 21:27 3.5KCOILS output, window length 14
[ ]jp_IgKdqeA.coilseq.lupas_212015-04-17 21:27 3.5KCOILS output, window length 21
[ ]jp_IgKdqeA.coilseq.lupas_282015-04-17 21:27 3.5KCOILS output, window length 28
[ ]jp_IgKdqeA.concise2015-04-17 21:27 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_IgKdqeA.concise.blc2015-04-17 21:27 4.8KBLC format prediction and alignment data
[ ]jp_IgKdqeA.concise.fasta2015-04-17 21:27 4.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_IgKdqeA.concise.pdf2015-04-17 21:27 52KPDF prediction and alignment data
[ ]jp_IgKdqeA.concise.ps2015-04-17 21:27 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_IgKdqeA.fasta2015-04-17 21:25 97 Input query sequence in FASTA format
[ ]jp_IgKdqeA.full_MSA.fasta2015-04-17 21:27 7.3KFull MSA before JPred filters in FASTA
[TXT]jp_IgKdqeA.full_MSA.fasta.noGaps.html2015-04-17 21:27 13KFull MSA before JPred filters in FASTA
[TXT]jp_IgKdqeA.full_MSA.fasta.withGaps.html2015-04-17 21:27 27KFull MSA before JPred filters in FASTA
[ ]jp_IgKdqeA.hmm2015-04-17 21:27 16KHHMer2 profile of the alignment
[TXT]jp_IgKdqeA.html2015-04-17 21:27 19KHTML prediction and alignment data
[ ]jp_IgKdqeA.input2015-04-17 19:06 90 Raw input data for analysis
[ ]jp_IgKdqeA.jalview2015-04-17 21:27 2.5KJalview annotation file for alignment
[ ]jp_IgKdqeA.jnet2015-04-17 21:27 3.1KJnet secondary structure output
[TXT]jp_IgKdqeA.profile2015-04-17 21:26 14KPSIBLAST profile from alignment
[ ]jp_IgKdqeA.pssm2015-04-17 21:27 18KPSIBLAST PSSM for Jnet
[TXT]jp_IgKdqeA.results.html2016-02-15 12:21 44KJPred results page
[TXT]jp_IgKdqeA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_IgKdqeA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_IgKdqeA.seq2015-04-17 19:06 97 Sequence data file
[TXT]jp_IgKdqeA.simple.html2015-04-17 21:27 1.2KBrief HTML: sequence and prediction only
[TXT]jp_IgKdqeA.svg.html2015-04-17 21:27 35KJalview SVG summary of results
[ ]jp_IgKdqeA.tar.gz2015-04-17 21:27 90KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.