JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:56 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3h0na_.name2015-04-17 17:03 0 Job name flag file
[ ]jp_Z2cmuCw.align2015-04-17 18:55 292KPSIBLAST alignment in FASTA format
[TXT]jp_Z2cmuCw.als2015-04-17 18:55 3.0KAlscript command file for PS/PDF output
[ ]jp_Z2cmuCw.blast.gz2015-04-17 18:52 1.2MCompressed PSIBLAST output file
[TXT]jp_Z2cmuCw.coils.csv2015-04-17 18:55 1.1KCOILS output in CSV format
[ ]jp_Z2cmuCw.coilseq.lupas_142015-04-17 18:55 7.7KCOILS output, window length 14
[ ]jp_Z2cmuCw.coilseq.lupas_212015-04-17 18:55 7.7KCOILS output, window length 21
[ ]jp_Z2cmuCw.coilseq.lupas_282015-04-17 18:55 7.7KCOILS output, window length 28
[ ]jp_Z2cmuCw.concise2015-04-17 18:55 569KPrediction: coiled-coil, solvent, alignment
[ ]jp_Z2cmuCw.concise.blc2015-04-17 18:55 291KBLC format prediction and alignment data
[ ]jp_Z2cmuCw.concise.fasta2015-04-17 18:55 294KPrediction: coiled-coil, solvent, alignment
[ ]jp_Z2cmuCw.concise.pdf2015-04-17 18:56 1.9MPDF prediction and alignment data
[ ]jp_Z2cmuCw.concise.ps2015-04-17 18:55 35MPrediction: coiled-coil, solvent, alignment
[ ]jp_Z2cmuCw.fasta2015-04-17 18:04 199 Input query sequence in FASTA format
[ ]jp_Z2cmuCw.full_MSA.fasta2015-04-17 18:52 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_Z2cmuCw.full_MSA.fasta.noGaps.html2015-04-17 18:56 581KFull MSA before JPred filters in FASTA
[TXT]jp_Z2cmuCw.full_MSA.fasta.withGaps.html2015-04-17 18:56 8.7MFull MSA before JPred filters in FASTA
[ ]jp_Z2cmuCw.hmm2015-04-17 18:55 35KHHMer2 profile of the alignment
[TXT]jp_Z2cmuCw.html2015-04-17 18:55 586KHTML prediction and alignment data
[ ]jp_Z2cmuCw.input2015-04-17 17:03 191 Raw input data for analysis
[ ]jp_Z2cmuCw.jalview2015-04-17 18:55 4.5KJalview annotation file for alignment
[ ]jp_Z2cmuCw.jnet2015-04-17 18:55 6.8KJnet secondary structure output
[TXT]jp_Z2cmuCw.profile2015-04-17 18:38 30KPSIBLAST profile from alignment
[ ]jp_Z2cmuCw.pssm2015-04-17 18:55 40KPSIBLAST PSSM for Jnet
[TXT]jp_Z2cmuCw.results.html2016-02-15 12:21 82KJPred results page
[TXT]jp_Z2cmuCw.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Z2cmuCw.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Z2cmuCw.seq2015-04-17 17:03 199 Sequence data file
[TXT]jp_Z2cmuCw.simple.html2015-04-17 18:55 1.5KBrief HTML: sequence and prediction only
[TXT]jp_Z2cmuCw.svg.html2015-04-17 18:56 74KJalview SVG summary of results
[ ]jp_Z2cmuCw.tar.gz2015-04-17 18:56 4.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.