A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:55 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3h7ia1.name | 2015-04-17 17:40 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_tjh33NZ.align | 2015-04-17 20:54 | 151K | PSIBLAST alignment in FASTA format |
| jp_tjh33NZ.als | 2015-04-17 20:54 | 3.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_tjh33NZ.blast.gz | 2015-04-17 20:53 | 2.7M | Compressed PSIBLAST output file |
| jp_tjh33NZ.coils.csv | 2015-04-17 20:54 | 1.1K | COILS output in CSV format |
| jp_tjh33NZ.coilseq.lupas_14 | 2015-04-17 20:54 | 7.4K | COILS output, window length 14 |
| jp_tjh33NZ.coilseq.lupas_21 | 2015-04-17 20:54 | 7.4K | COILS output, window length 21 |
| jp_tjh33NZ.coilseq.lupas_28 | 2015-04-17 20:54 | 7.4K | COILS output, window length 28 |
| jp_tjh33NZ.concise | 2015-04-17 20:54 | 297K | Prediction: coiled-coil, solvent, alignment |
| jp_tjh33NZ.concise.blc | 2015-04-17 20:54 | 151K | BLC format prediction and alignment data |
| jp_tjh33NZ.concise.fasta | 2015-04-17 20:54 | 153K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_tjh33NZ.concise.pdf | 2015-04-17 20:54 | 1.0M | PDF prediction and alignment data |
| jp_tjh33NZ.concise.ps | 2015-04-17 20:54 | 18M | Prediction: coiled-coil, solvent, alignment |
| jp_tjh33NZ.fasta | 2015-04-17 19:00 | 192 | Input query sequence in FASTA format |
| jp_tjh33NZ.full_MSA.fasta | 2015-04-17 20:53 | 7.5M | Full MSA before JPred filters in FASTA |
| jp_tjh33NZ.full_MSA.fasta.noGaps.html | 2015-04-17 20:54 | 1.4M | Full MSA before JPred filters in FASTA |
| jp_tjh33NZ.full_MSA.fasta.withGaps.html | 2015-04-17 20:54 | 24M | Full MSA before JPred filters in FASTA |
| jp_tjh33NZ.hmm | 2015-04-17 20:54 | 33K | HHMer2 profile of the alignment |
| jp_tjh33NZ.html | 2015-04-17 20:54 | 317K | HTML prediction and alignment data |
| jp_tjh33NZ.input | 2015-04-17 17:40 | 184 | Raw input data for analysis |
| jp_tjh33NZ.jalview | 2015-04-17 20:54 | 4.4K | Jalview annotation file for alignment |
| jp_tjh33NZ.jnet | 2015-04-17 20:54 | 6.5K | Jnet secondary structure output |
| jp_tjh33NZ.profile | 2015-04-17 20:33 | 29K | PSIBLAST profile from alignment |
| jp_tjh33NZ.pssm | 2015-04-17 20:54 | 38K | PSIBLAST PSSM for Jnet |
| jp_tjh33NZ.results.html | 2016-02-15 12:21 | 81K | JPred results page |
| jp_tjh33NZ.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_tjh33NZ.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_tjh33NZ.seq | 2015-04-17 17:40 | 192 | Sequence data file |
| jp_tjh33NZ.simple.html | 2015-04-17 20:54 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_tjh33NZ.svg.html) | jp_tjh33NZ.svg.html | 2015-04-17 20:54 | 73K | Jalview SVG summary of results |
| jp_tjh33NZ.tar.gz | 2015-04-17 20:55 | 6.3M | Archive containing complete results |
